Clone BS21335 Report

Search the DGRC for BS21335

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:213
Well:35
Vector:pDNR-Dual
Associated Gene/TranscriptCG34164-RB
Protein status:BS21335.pep: full length peptide match
Sequenced Size:353

Clone Sequence Records

BS21335.complete Sequence

353 bp assembled on 2011-01-18

GenBank Submission: KX804718

> BS21335.complete
GAAGTTATCAGTCGACATGAATTCAAGTTTCAACAGCGAGCAGTTGGACA
CCGACCGCGATGGACTGCAAAAAATTCTGGCCCGATCTCTCAAGGAACCC
ATTCTTGGCAAGCACTTTGCCCTGCCTGGCCGCATAGAGCAGAGTCCACC
CATCGAACTGGACACCAGCCAGAGCTACATTGCCGTCTACACTCATCTCA
AAGTGCACGCCACCATGATGCCGGAGAGATTGCCCACGCCGGAGGCAATC
GGACGAATACAGGCGGAGAACTTGGAGGCAGCGCCCAAGGCACGAAGTTC
AAAGACCCGCTTGGATCCCTGCTCAAATATAAATTAAAAGCTTTCTAGAC
CAT

BS21335.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:42:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG34164-RC 321 CG34164-PC 1..321 17..337 1605 100 Plus
CG34164-RB 321 CG34164-PB 1..321 17..337 1605 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:42:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG34164-RC 474 CG34164-RC 116..437 17..338 1610 100 Plus
CG34164-RB 1771 CG34164-RB 1413..1734 17..338 1610 100 Plus
RpL7-like-RB 1771 CG5317-RB 1413..1734 17..338 1610 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:42:51
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12057893..12058214 17..338 1610 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:42:52 has no hits.

BS21335.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-09 09:37:34 Download gff for BS21335.complete
Subject Subject Range Query Range Percent Splice Strand
RpL7-like-RB 1437..1755 17..335 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:56:51 Download gff for BS21335.complete
Subject Subject Range Query Range Percent Splice Strand
RpL7-like-RB 1413..1731 17..335 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:18:45 Download gff for BS21335.complete
Subject Subject Range Query Range Percent Splice Strand
RpL7-like-RB 1413..1731 17..335 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:18:45 Download gff for BS21335.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12057893..12058211 17..335 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:56:51 Download gff for BS21335.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12057893..12058211 17..335 100   Plus

BS21335.pep Sequence

Translation from 16 to 336

> BS21335.pep
MNSSFNSEQLDTDRDGLQKILARSLKEPILGKHFALPGRIEQSPPIELDT
SQSYIAVYTHLKVHATMMPERLPTPEAIGRIQAENLEAAPKARSSKTRLD
PCSNIN*

BS21335.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:09:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG34164-PC 106 CG34164-PC 1..106 1..106 541 100 Plus
CG34164-PB 106 CG34164-PB 1..106 1..106 541 100 Plus
WDY-PC 1069 CG45799-PC 942..1010 17..85 221 62.3 Plus