BS21339.complete Sequence
464 bp assembled on 2011-01-18
GenBank Submission: KX801622
> BS21339.complete
GAAGTTATCAGTCGACATGACTACAGAAAAAGGGGAGCAGTTGAGACAAC
AACTTATAGCGGCGGTGGTAAAGAAACGAGCGGCGATTGCGAGAGCCCAT
GAAATCGTGGTGCGGCTTTTGGAGCCCGGAATACCGGAGCCCGAGTTCCT
GTCCCTGCTCTGTGAGATTGGCCCCCCAAATTATTCAGACATAGTGGATG
AGCGGGAAATAAACAAACTTTGTGGATATCCACTTTGTTCGACAGTTCTA
GAAAACGTTCCCAAGCAAAAGTACAGTATCTCCGCTTCCAAAAACAAAGT
ATACGACATCACAGAACGCAAGAAATTCTGTTCCGGATACTGTTTTAAGG
CCTCCGAATATATTAAGTCACAGGTGCCCACATCGCCATTGTGGCTGCGA
GATAGGGAGACGAGACCTAGCTTTCAGCTGCTACCACGAAATACTTGAAA
GCTTTCTAGACCAT
BS21339.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:04:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34183-RA | 432 | CG34183-PA | 1..432 | 17..448 | 2115 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:04:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34183-RA | 533 | CG34183-RA | 33..464 | 17..448 | 2115 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:04:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9890130..9890322 | 448..256 | 950 | 99.5 | Minus |
| 2L | 23513712 | 2L | 9890542..9890655 | 157..44 | 555 | 99.1 | Minus |
| 2L | 23513712 | 2L | 9890386..9890484 | 255..157 | 480 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:04:22 has no hits.
BS21339.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:14 Download gff for
BS21339.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34183-RA | 48..478 | 17..447 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:47:08 Download gff for
BS21339.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34183-RA | 33..463 | 17..447 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:55:41 Download gff for
BS21339.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34183-RA | 33..463 | 17..447 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:41 Download gff for
BS21339.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9890131..9890322 | 256..447 | 99 | <- | Minus |
| 2L | 9890386..9890483 | 158..255 | 98 | <- | Minus |
| 2L | 9890542..9890653 | 46..157 | 99 | <- | Minus |
| 2L | 9890712..9890740 | 17..45 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:47:08 Download gff for
BS21339.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9890131..9890322 | 256..447 | 99 | <- | Minus |
| arm_2L | 9890386..9890483 | 158..255 | 98 | <- | Minus |
| arm_2L | 9890542..9890653 | 46..157 | 99 | <- | Minus |
| arm_2L | 9890712..9890740 | 17..45 | 100 | | Minus |
BS21339.pep Sequence
Translation from 16 to 447
> BS21339.pep
MTTEKGEQLRQQLIAAVVKKRAAIARAHEIVVRLLEPGIPEPEFLSLLCE
IGPPNYSDIVDEREINKLCGYPLCSTVLENVPKQKYSISASKNKVYDITE
RKKFCSGYCFKASEYIKSQVPTSPLWLRDRETRPSFQLLPRNT*
BS21339.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:07:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34183-PA | 143 | CG34183-PA | 1..143 | 1..143 | 744 | 100 | Plus |
