BS21346.complete Sequence
950 bp assembled on 2011-01-18
GenBank Submission: KX802359
> BS21346.complete
GAAGTTATCAGTCGACATGAGCTTCTCGGAAAACACCTCCGATTCTGAAT
GGAAGACAGACAAAATGCTAAAGGCGCGGACTGCTAAGAAATCTTTAAAG
CTGGACAAGGAGCACAGAACTCTGAAACCTAAATATAACCAGAAGTTCTG
CGAAAAGTGGCTCAAGATTTTCGATCCATGGCTCCGACGGGCGGCCGAGG
ATCCTAACAAGCCATTCTGCCGCGCTTGCCAGTGCACCATGGACTGCAAT
CGATGCCACCTGGTGCGGCACGAGCGAACCACCAAGCACAAGCGCAATCT
GGAGGCTCTGCTCACAAAGGGCGAAGGCGCGGCGGTCCAGGAGTTCCGGA
TTCGCCAGCAGCGTAGCAAGTACTATCACCAGCGTAAATTGGTAGTGATG
GAGCCCTTGGCTGAGAACCACGAGTTGGAGCCGCCTTCCACTCCAGAGCC
TATGCCCGTGATGGCCATTGCTGATCAAAGCCTCTGTTCTGCAGCCAGTG
AGAAGGTGACAGTACCCAAACAGGAGTTCTTATCAGAGACAGAGGTCACA
ACAAAGATGACCGAACCCCCGTCAAGCCATGCCAATTGCAGTGACAGCTC
CTCTTCTGCCTCTAAGCAGGAGGGCATAAAGTTACTAATGCAGATCCACC
AGGACAAAAACGAACTCATGGAATCCTTCCGCGAGCTGATGGGAAGCCAG
AGGACCCTAAGTCACACACCGCCGCCCAAGGAGAAGAATCATGTGGATCT
GTTTTTCGAAAGCGTCAGTTCCAGCGTGAAAGCCCTCTCGCCAAAGTTGG
TAGCGGAAGCCAAGATGCGAGTATCGCAGCTGATCTGTGAGCTCGAGCTT
CGCGGCCTCAGTGAAACCAGCCAAACGGACGCACTGAATCCAAACCCTCA
AGCTAATGAATCGCTCGCACTGCGCCCATCATGAAAGCTTTCTAGACCAT
BS21346.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:04:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34149-RB | 918 | CG34149-PB | 1..918 | 17..934 | 4590 | 100 | Plus |
CG34149-RA | 918 | CG34149-PA | 1..918 | 17..934 | 4590 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:04:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34149-RB | 1032 | CG34149-RB | 40..957 | 17..934 | 4590 | 100 | Plus |
CG34149-RA | 1072 | CG34149-RA | 40..957 | 17..934 | 4590 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:04:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22380255..22381138 | 51..934 | 4420 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:04:02 has no hits.
BS21346.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:12 Download gff for
BS21346.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34149-RB | 40..956 | 17..933 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:58 Download gff for
BS21346.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34149-RA | 40..956 | 17..933 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:55:32 Download gff for
BS21346.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34149-RA | 40..956 | 17..933 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:32 Download gff for
BS21346.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22380167..22380201 | 17..51 | 100 | -> | Plus |
3R | 22380256..22381137 | 52..933 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:58 Download gff for
BS21346.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18205889..18205923 | 17..51 | 100 | -> | Plus |
arm_3R | 18205978..18206859 | 52..933 | 100 | | Plus |
BS21346.pep Sequence
Translation from 16 to 933
> BS21346.pep
MSFSENTSDSEWKTDKMLKARTAKKSLKLDKEHRTLKPKYNQKFCEKWLK
IFDPWLRRAAEDPNKPFCRACQCTMDCNRCHLVRHERTTKHKRNLEALLT
KGEGAAVQEFRIRQQRSKYYHQRKLVVMEPLAENHELEPPSTPEPMPVMA
IADQSLCSAASEKVTVPKQEFLSETEVTTKMTEPPSSHANCSDSSSSASK
QEGIKLLMQIHQDKNELMESFRELMGSQRTLSHTPPPKEKNHVDLFFESV
SSSVKALSPKLVAEAKMRVSQLICELELRGLSETSQTDALNPNPQANESL
ALRPS*
BS21346.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:07:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34149-PB | 305 | CG34149-PB | 1..305 | 1..305 | 1590 | 100 | Plus |
CG34149-PA | 305 | CG34149-PA | 1..305 | 1..305 | 1590 | 100 | Plus |
CG43342-PA | 180 | CG31169-PA | 56..151 | 196..283 | 154 | 42.3 | Plus |