BS21352.complete Sequence
620 bp assembled on 2011-01-18
GenBank Submission: KX804704
> BS21352.complete
GAAGTTATCAGTCGACATGAAATACTTCGAATTCCTAAGCCTTTCGTCGG
TGGGCCTCTGCATAGCCTGTGGGGACTTGCTATTAGCAGTGAGCATACTG
GGTCCTTCGAGCTTTTACCTATACCTCGATTTCATGGATATTGAAAAATG
GGAACAGGATGCCGAAGTGGAAGCTTTGACTCCCATTGGAACCTTCTTTT
CAACATTGGTGAACTATCTGTGGGTGCGAGAGTTCTCGCAGGTTTTCTAT
ATGACAGCAACGTTTATAATTTGGGTGAAGGCAATGATAAACCTAATGGT
GGCCTGTATTCTTATCGACGGCATAAAGCAGAAACGTCTCGTATGTATTG
CTCCCTGGTTGATAAACTCATGCCTATCAATGGTTGTTGAAACGGGCATT
TTTGTGAGCCTGGAGCTGCGAATTGATGAAGTTGATGCCGCAGTGGATCG
TCGAATAGCGAGAAGCCTAATCTTTGGCGTATTTATAGTGCTGAACGCGT
TATTTTCGTATGGTATCTTTGCTCTTTATCGCAAGCTAAAGTCTGACCCC
AGTGAGAATGTTGAAGTCATTCCCCAAAGCCCGCCACACACATTTAATGC
CTGAAAGCTTTCTAGACCAT
BS21352.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:22:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34138-RA | 588 | CG34138-PA | 1..588 | 17..604 | 2925 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:22:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34138-RA | 748 | CG34138-RA | 72..660 | 17..605 | 2930 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:22:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 19635020..19635212 | 17..209 | 950 | 99.5 | Plus |
3R | 32079331 | 3R | 19635456..19635614 | 330..488 | 795 | 100 | Plus |
3R | 32079331 | 3R | 19635267..19635389 | 209..331 | 615 | 100 | Plus |
3R | 32079331 | 3R | 19635673..19635791 | 487..605 | 595 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:22:13 has no hits.
BS21352.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:28 Download gff for
BS21352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34138-RA | 72..658 | 17..603 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:54:51 Download gff for
BS21352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34138-RA | 72..658 | 17..603 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:37 Download gff for
BS21352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34138-RA | 72..658 | 17..603 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:37 Download gff for
BS21352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 19635020..19635212 | 17..209 | 99 | -> | Plus |
3R | 19635268..19635389 | 210..331 | 100 | -> | Plus |
3R | 19635458..19635614 | 332..488 | 100 | -> | Plus |
3R | 19635675..19635789 | 489..603 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:54:51 Download gff for
BS21352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 15460742..15460934 | 17..209 | 99 | -> | Plus |
arm_3R | 15460990..15461111 | 210..331 | 100 | -> | Plus |
arm_3R | 15461180..15461336 | 332..488 | 100 | -> | Plus |
arm_3R | 15461397..15461511 | 489..603 | 100 | | Plus |
BS21352.pep Sequence
Translation from 16 to 603
> BS21352.pep
MKYFEFLSLSSVGLCIACGDLLLAVSILGPSSFYLYLDFMDIEKWEQDAE
VEALTPIGTFFSTLVNYLWVREFSQVFYMTATFIIWVKAMINLMVACILI
DGIKQKRLVCIAPWLINSCLSMVVETGIFVSLELRIDEVDAAVDRRIARS
LIFGVFIVLNALFSYGIFALYRKLKSDPSENVEVIPQSPPHTFNA*
BS21352.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:07:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34138-PA | 195 | CG34138-PA | 1..195 | 1..195 | 997 | 100 | Plus |