Clone BS21353 Report

Search the DGRC for BS21353

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:213
Well:53
Vector:pDNR-Dual
Associated Gene/TranscriptCG34292-RA
Protein status:BS21353.pep: full length peptide match
Sequenced Size:620

Clone Sequence Records

BS21353.complete Sequence

620 bp assembled on 2011-01-18

GenBank Submission: KX801876

> BS21353.complete
GAAGTTATCAGTCGACATGTTTCGTTCTCTATCCGTGCTGATGTTCAATA
CTTCTCAAATAGAGACAAATCTCTTTGGCATGGCCGACGATGTGTACAAT
ACCATTGAGATCTTCAAAGAGGCCGCCAGTTTCGAGGCCAAGATTGGTAG
ACCCTATAGAATGATATCGAGCCTTATAGACTGCTTGGTCTTCATGGTGG
TGGCTCTAATGGTGGTCGGTTTCATCATGTACGATCGCATTATGCTGTTT
ACAAAACTGGCTAAGATCAATCAGAGATATAACCAAGAGGTGACTGTAAA
AGCAAAAAGAATTCGAAAGCCCAAAACATCCGATTCTCTCCCAGAAGAAG
ATGATACCGAAAATGCTGTGGATCAGGCAGAAGAAGACGGTATCAGCGTG
GCACATTCCGAATATGCAACAGATGACGATGTCGCAACCCTTCAACCCAT
TGACGATGAAGATACAATTAAAGTCGCAATGTTCGGAACTCCCAATTGGG
CCTTTAAATGGCTAGCCACTATAAGAAACGAAAGTTTCGGATCAATTTAC
GATGGGTACTTCCGTAGATTGCATCTACACGTCACACATTGTAAATCGGT
TTAGAAGCTTTCTAGACCAT

BS21353.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:22:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG34292-RA 588 CG34292-PA 1..588 17..604 2940 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:22:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG34292-RA 844 CG34292-RA 61..648 17..604 2940 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:22:16
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 27062276..27062863 17..604 2940 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:22:17 has no hits.

BS21353.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:28 Download gff for BS21353.complete
Subject Subject Range Query Range Percent Splice Strand
CG34292-RA 67..648 23..604 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:54:54 Download gff for BS21353.complete
Subject Subject Range Query Range Percent Splice Strand
CG34292-RA 67..648 23..604 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:39 Download gff for BS21353.complete
Subject Subject Range Query Range Percent Splice Strand
CG34292-RA 67..648 23..604 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:39 Download gff for BS21353.complete
Subject Subject Range Query Range Percent Splice Strand
3R 27062282..27062863 23..604 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:54:54 Download gff for BS21353.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22888004..22888585 23..604 100   Plus

BS21353.pep Sequence

Translation from 16 to 603

> BS21353.pep
MFRSLSVLMFNTSQIETNLFGMADDVYNTIEIFKEAASFEAKIGRPYRMI
SSLIDCLVFMVVALMVVGFIMYDRIMLFTKLAKINQRYNQEVTVKAKRIR
KPKTSDSLPEEDDTENAVDQAEEDGISVAHSEYATDDDVATLQPIDDEDT
IKVAMFGTPNWAFKWLATIRNESFGSIYDGYFRRLHLHVTHCKSV*

BS21353.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:07:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG34292-PA 195 CG34292-PA 1..195 1..195 1003 100 Plus