BS21356.complete Sequence
605 bp assembled on 2011-01-18
GenBank Submission: KX802603
> BS21356.complete
GAAGTTATCAGTCGACATGATCAATGAGCTATCCGCTCCTAAGCTTAAGC
TTGTATTCATTAATGTATTTTCGATTTTGCACAGTACCACTTATTTGAAT
GTGTACCGCTTATATGCAGACTTAAAAAATGTTAAAGCTGGCGTGGATGG
GTCTAATGAGGAGCTTTGGATCAGGGAAATCTTTACATTCCTCATCAGTG
CTCTCATAGTGATTCGCTTTTGTCTATGCTTCGTAGGATTGGCTTCTAAC
ATTGTGGCCATATACCCAATTCTAACAAATTCGCAAGCTGAGATGCTTAT
GCCTACCATTATAGTGCAGGCCATTGACAAAGTCATTCTAAATCTATACG
AGATTATTTTGGGCTACGGCAGCTTGTGCTATCTCTATCCTGAAAGTACG
GCTGTTTTCATCTTCTTCCTTATACAGATGGGAGCCAAGATTGTCTGCAG
CATCTCTGTCTTGAATATTTATTCGGACCATCACAATCACTTGGCAACTC
TAGTTTCCTTCAACGAGGAATCACATAGCTTGGGACCAGACAGTGTAGAA
GAAATCGAATTGGGGAACCAAAACTTGGATTTTTCCTAAAAGCTTTCTAG
ACCAT
BS21356.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:22:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34307-RB | 573 | CG34307-PB | 1..573 | 17..589 | 2865 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:22:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34307-RB | 718 | CG34307-RB | 76..648 | 17..589 | 2865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:22:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11897657..11897901 | 17..261 | 1225 | 100 | Plus |
3R | 32079331 | 3R | 11897961..11898162 | 262..463 | 1010 | 100 | Plus |
3R | 32079331 | 3R | 11898223..11898349 | 463..589 | 635 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:22:26 has no hits.
BS21356.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:30 Download gff for
BS21356.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34307-RB | 76..646 | 17..587 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:54:58 Download gff for
BS21356.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34307-RB | 76..646 | 17..587 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:43 Download gff for
BS21356.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34307-RB | 76..646 | 17..587 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:43 Download gff for
BS21356.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11898223..11898347 | 463..587 | 100 | | Plus |
3R | 11897961..11898161 | 262..462 | 100 | -> | Plus |
3R | 11897657..11897901 | 17..261 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:54:58 Download gff for
BS21356.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 7723379..7723623 | 17..261 | 100 | -> | Plus |
arm_3R | 7723683..7723883 | 262..462 | 100 | -> | Plus |
arm_3R | 7723945..7724069 | 463..587 | 100 | | Plus |
BS21356.pep Sequence
Translation from 16 to 588
> BS21356.pep
MINELSAPKLKLVFINVFSILHSTTYLNVYRLYADLKNVKAGVDGSNEEL
WIREIFTFLISALIVIRFCLCFVGLASNIVAIYPILTNSQAEMLMPTIIV
QAIDKVILNLYEIILGYGSLCYLYPESTAVFIFFLIQMGAKIVCSISVLN
IYSDHHNHLATLVSFNEESHSLGPDSVEEIELGNQNLDFS*
BS21356.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:07:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34307-PB | 190 | CG34307-PB | 1..190 | 1..190 | 961 | 100 | Plus |