Clone BS21356 Report

Search the DGRC for BS21356

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:213
Well:56
Vector:pDNR-Dual
Associated Gene/TranscriptCG34307-RB
Protein status:BS21356.pep: full length peptide match
Sequenced Size:605

Clone Sequence Records

BS21356.complete Sequence

605 bp assembled on 2011-01-18

GenBank Submission: KX802603

> BS21356.complete
GAAGTTATCAGTCGACATGATCAATGAGCTATCCGCTCCTAAGCTTAAGC
TTGTATTCATTAATGTATTTTCGATTTTGCACAGTACCACTTATTTGAAT
GTGTACCGCTTATATGCAGACTTAAAAAATGTTAAAGCTGGCGTGGATGG
GTCTAATGAGGAGCTTTGGATCAGGGAAATCTTTACATTCCTCATCAGTG
CTCTCATAGTGATTCGCTTTTGTCTATGCTTCGTAGGATTGGCTTCTAAC
ATTGTGGCCATATACCCAATTCTAACAAATTCGCAAGCTGAGATGCTTAT
GCCTACCATTATAGTGCAGGCCATTGACAAAGTCATTCTAAATCTATACG
AGATTATTTTGGGCTACGGCAGCTTGTGCTATCTCTATCCTGAAAGTACG
GCTGTTTTCATCTTCTTCCTTATACAGATGGGAGCCAAGATTGTCTGCAG
CATCTCTGTCTTGAATATTTATTCGGACCATCACAATCACTTGGCAACTC
TAGTTTCCTTCAACGAGGAATCACATAGCTTGGGACCAGACAGTGTAGAA
GAAATCGAATTGGGGAACCAAAACTTGGATTTTTCCTAAAAGCTTTCTAG
ACCAT

BS21356.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:22:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG34307-RB 573 CG34307-PB 1..573 17..589 2865 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:22:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG34307-RB 718 CG34307-RB 76..648 17..589 2865 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:22:25
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11897657..11897901 17..261 1225 100 Plus
3R 32079331 3R 11897961..11898162 262..463 1010 100 Plus
3R 32079331 3R 11898223..11898349 463..589 635 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:22:26 has no hits.

BS21356.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:30 Download gff for BS21356.complete
Subject Subject Range Query Range Percent Splice Strand
CG34307-RB 76..646 17..587 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:54:58 Download gff for BS21356.complete
Subject Subject Range Query Range Percent Splice Strand
CG34307-RB 76..646 17..587 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:43 Download gff for BS21356.complete
Subject Subject Range Query Range Percent Splice Strand
CG34307-RB 76..646 17..587 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:43 Download gff for BS21356.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11898223..11898347 463..587 100   Plus
3R 11897961..11898161 262..462 100 -> Plus
3R 11897657..11897901 17..261 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:54:58 Download gff for BS21356.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7723379..7723623 17..261 100 -> Plus
arm_3R 7723683..7723883 262..462 100 -> Plus
arm_3R 7723945..7724069 463..587 100   Plus

BS21356.pep Sequence

Translation from 16 to 588

> BS21356.pep
MINELSAPKLKLVFINVFSILHSTTYLNVYRLYADLKNVKAGVDGSNEEL
WIREIFTFLISALIVIRFCLCFVGLASNIVAIYPILTNSQAEMLMPTIIV
QAIDKVILNLYEIILGYGSLCYLYPESTAVFIFFLIQMGAKIVCSISVLN
IYSDHHNHLATLVSFNEESHSLGPDSVEEIELGNQNLDFS*

BS21356.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:07:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG34307-PB 190 CG34307-PB 1..190 1..190 961 100 Plus