BS21362.complete Sequence
1034 bp assembled on 2011-01-31
GenBank Submission: KX801966
> BS21362.complete
GAAGTTATCAGTCGACATGGACGTATCCGCCTCCACGTCGTTTGAATCCT
CGCCGGACAAGAGAAACAGCATCTATGTGGGCGACAACACTTTCTACGAC
AGCGCCCTGGATCACCAGCTGTCCACCACGGCCTACAAGTCGTGCAATGG
TAAGCATCCAAACCTATACAAAGCCCTCAAGATCCTGAGTAGCAGAGATC
CGCGAACGGAGGGCCACGTCTTCCAGGAGAATCACCCGTTCTCCTCGAAA
GCAGAAAAGTTTCAGCGGTCGGAAAAAGAAGTAGACCTCTCTACATACGG
GCAGGACACGGATATGGACCACAAGTTAACCGAAATGGGTAATCAAAGCG
CTTCCTTCACAAATCCGGAGTATATAGGAGAATCGGAAGAAGATGAGTTT
CCTTCGAGAGCTATTTACGAGCAAAAGAACCTCATAGATGAGCACGACCA
ATTGGATCGCAAGGTTAATGAGCTCAAACTGAAGCTCGTTGTTCTGCAAA
TTCAAACAAGACATCAGAAGCAAACGATCGAGAATCTTAAATTGCAGAGC
AGCCAAAAGCTGAGCTTCAGTCAGAGCATAAAGAAAACAATAATGGTAGC
AGCCCGAGAGAGTCTGCAATCCCAAACGCCCGATACGTTTCCCGATCATT
TAATATCGCAAATATTTGCGCCATTTGCGGACGATGAGAAACTTAATGAT
CATTTTAAGAATATGGACTACGAACTGAAGCAAATAGTGCAGAAAATGTG
CAGACATGCCTACGAAAGCCAGAAGCCTTTCCTAAAAGACACTATCAGTG
AGAAGATTAAGAAGCTTAAGCAGAGGCTTATTCAAAAGTATGAGGACCAG
TTGGACAGGCAAAAAGAAAGCCAACAGCGAAACGCGTTAGCCATGAAGCA
AAAGTGTTTCGATCTGCTGAAGCAGTTCCTTTTAACCGACTGCCAAGATG
AAAGTTGCAACGAAGATTATATAAAGAAGCTGGAAGCTCTATATGAACAG
GAAATCTTAAAAAAATAAAAGCTTTCTAGACCAT
BS21362.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:34:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12360-RC | 1002 | CG12360-PC | 1..1002 | 17..1018 | 5010 | 100 | Plus |
| CG12360-RB | 1599 | CG12360-PB | 1..133 | 17..149 | 665 | 100 | Plus |
| CG12360-RA | 1599 | CG12360-PA | 1..133 | 17..149 | 665 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:34:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12360-RC | 1309 | CG12360-RC | 178..1181 | 16..1019 | 5020 | 100 | Plus |
| CG12360-RB | 2795 | CG12360-RB | 178..311 | 16..149 | 670 | 100 | Plus |
| CG12360-RA | 2158 | CG12360-RA | 349..482 | 16..149 | 670 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:34:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13029049..13030052 | 1019..16 | 5020 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:34:44 has no hits.
BS21362.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:31:49 Download gff for
BS21362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12360-RC | 179..1170 | 17..1008 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:02:37 Download gff for
BS21362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12360-RC | 179..1170 | 17..1008 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:04:53 Download gff for
BS21362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12360-RC | 179..1170 | 17..1008 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:04:53 Download gff for
BS21362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13029060..13030051 | 17..1008 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:02:37 Download gff for
BS21362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8854782..8855773 | 17..1008 | 100 | | Minus |
BS21362.pep Sequence
Translation from 16 to 1017
> BS21362.pep
MDVSASTSFESSPDKRNSIYVGDNTFYDSALDHQLSTTAYKSCNGKHPNL
YKALKILSSRDPRTEGHVFQENHPFSSKAEKFQRSEKEVDLSTYGQDTDM
DHKLTEMGNQSASFTNPEYIGESEEDEFPSRAIYEQKNLIDEHDQLDRKV
NELKLKLVVLQIQTRHQKQTIENLKLQSSQKLSFSQSIKKTIMVAARESL
QSQTPDTFPDHLISQIFAPFADDEKLNDHFKNMDYELKQIVQKMCRHAYE
SQKPFLKDTISEKIKKLKQRLIQKYEDQLDRQKESQQRNALAMKQKCFDL
LKQFLLTDCQDESCNEDYIKKLEALYEQEILKK*
BS21362.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:04:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12360-PC | 333 | CG12360-PC | 1..333 | 1..333 | 1717 | 100 | Plus |
| CG12360-PB | 532 | CG12360-PB | 1..44 | 1..44 | 229 | 100 | Plus |
| CG12360-PA | 532 | CG12360-PA | 1..44 | 1..44 | 229 | 100 | Plus |
