BS21365.complete Sequence
290 bp assembled on 2011-01-18
GenBank Submission: KX804099
> BS21365.complete
GAAGTTATCAGTCGACATGGGTCACCTGCAGTTGGATTTCCATTCCATAC
CTAAGCTCCATGGCAGGGAGAACTATTGGCAGTGGCGCATCCTCCTGAAG
ACCTTTCTGGAGGCCAACGATCTGTGGAAGCACAACGAACCGAAGGAGAG
CCCAGAAACCAAATTCCTGATTTTGGCCAGCGTTACGGCCGATAAGATTG
AGCCATCCTACGATGATCAAAGCTGTTCGTACATTTTCCAAAACATGGAG
AGTCGATTCGGGCCTTTTAGTTAAAAGCTTTCTAGACCAT
BS21365.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:23:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34301-RA | 258 | CG34301-PA | 1..258 | 17..274 | 1290 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:23:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34301-RA | 307 | CG34301-RA | 6..269 | 13..276 | 1305 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:23:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8773440..8773575 | 13..148 | 665 | 99.3 | Plus |
3R | 32079331 | 3R | 8773643..8773772 | 147..276 | 650 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:23:09 has no hits.
BS21365.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:36 Download gff for
BS21365.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34301-RA | 10..265 | 17..272 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:55:20 Download gff for
BS21365.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34301-RA | 10..265 | 17..272 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:03 Download gff for
BS21365.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34301-RA | 10..265 | 17..272 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:03 Download gff for
BS21365.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8773444..8773575 | 17..148 | 100 | -> | Plus |
3R | 8773645..8773768 | 149..272 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:55:20 Download gff for
BS21365.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4599166..4599297 | 17..148 | 100 | -> | Plus |
arm_3R | 4599367..4599490 | 149..272 | 100 | | Plus |
BS21365.pep Sequence
Translation from 16 to 273
> BS21365.pep
MGHLQLDFHSIPKLHGRENYWQWRILLKTFLEANDLWKHNEPKESPETKF
LILASVTADKIEPSYDDQSCSYIFQNMESRFGPFS*
BS21365.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:00:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34301-PA | 85 | CG34301-PA | 1..85 | 1..85 | 467 | 100 | Plus |
CG42446-PA | 123 | CG42446-PA | 39..109 | 11..81 | 169 | 42.3 | Plus |