BS21368.complete Sequence
302 bp assembled on 2011-01-18
GenBank Submission: KX806172
> BS21368.complete
GAAGTTATCAGTCGACATGGCTTTTCTTTTTAAACTATTTACCTTCTTGG
CGGTGGCCGCCATTTTGATCCAAATGACACTTGCACTGGAGTTTATGGAT
GAAGACTTTCTGGCAAACGATGACGGTCATCACTTGGACGAAGAGTCCGC
TGAAGTGCCTGGTATTTTGACTGGTTATACCAGAGATACGATCGCTCACT
TTAATCCTCGCAAAGTAGATGGGGGATTTCGACAATTGTGGGAACGTGTT
CCCCTTCAAAAAGTCGATGATATTAAGCGGAGATAGAAGCTTTCTAGACC
AT
BS21368.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:23:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42246-RB | 270 | CG42246-PB | 1..270 | 17..286 | 1350 | 100 | Plus |
CG42246-RA | 270 | CG42246-PA | 1..270 | 17..286 | 1350 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:23:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42246-RB | 387 | CG42246-RB | 70..340 | 16..286 | 1355 | 100 | Plus |
CG42246-RA | 578 | CG42246-RA | 70..340 | 16..286 | 1355 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:23:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 7411505..7411715 | 286..76 | 1055 | 100 | Minus |
X | 23542271 | X | 7411777..7411837 | 76..16 | 305 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 16:23:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 3915..3979 | 121..59 | 121 | 69.2 | Minus |
BS21368.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:37 Download gff for
BS21368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42246-RA | 86..340 | 32..286 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:55:21 Download gff for
BS21368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42246-RA | 86..340 | 32..286 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:05 Download gff for
BS21368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42246-RA | 86..340 | 32..286 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:05 Download gff for
BS21368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 7411505..7411714 | 77..286 | 100 | <- | Minus |
X | 7411777..7411821 | 32..76 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:55:21 Download gff for
BS21368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 7305538..7305747 | 77..286 | 100 | <- | Minus |
arm_X | 7305810..7305854 | 32..76 | 100 | | Minus |
BS21368.pep Sequence
Translation from 16 to 285
> BS21368.pep
MAFLFKLFTFLAVAAILIQMTLALEFMDEDFLANDDGHHLDEESAEVPGI
LTGYTRDTIAHFNPRKVDGGFRQLWERVPLQKVDDIKRR*
BS21368.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:00:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42246-PB | 89 | CG42246-PB | 1..89 | 1..89 | 462 | 100 | Plus |
CG42246-PA | 89 | CG42246-PA | 1..89 | 1..89 | 462 | 100 | Plus |