Clone BS21370 Report

Search the DGRC for BS21370

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:213
Well:70
Vector:pDNR-Dual
Associated Gene/TranscriptCG34165-RA
Protein status:BS21370.pep: full length peptide match
Sequenced Size:332

Clone Sequence Records

BS21370.complete Sequence

332 bp assembled on 2011-01-18

GenBank Submission: KX800920

> BS21370.complete
GAAGTTATCAGTCGACATGAAATTCACGATAATCGTTTTTGTTGCGCTCC
TCGCCTTTGCATCGGCCCAGTTCGGTCCGTTTGGTCAAATTATTAGGGGT
ATTGAACGATTTGAAGGTGGTCTGCAACAACAACAGCAGCAGCAGCAAAG
CGGCTTTGGCGGTGGTCAGCAGCAGCAACAGCAGGAGGAGGGTGTCATCT
TCAGAGGTCCTTTCGGCGGCGGAGTGGAGTTCTTCCAGGAGCAACAGCAG
CAGCAGCAAGGCGGTGGAGGTCAGCAGCAACAGCAGCAGGAGAACCTATT
TAACTTCTTCGGCTAAAAGCTTTCTAGACCAT

BS21370.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:23:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG34165-RB 300 CG34165-PB 1..300 17..316 1500 100 Plus
CG34165-RA 300 CG34165-PA 1..300 17..316 1500 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:23:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG34165-RB 686 CG34165-RB 78..380 15..317 1515 100 Plus
CG34165-RA 515 CG34165-RA 78..380 15..317 1515 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:23:05
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 14713931..14714220 28..317 1450 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:23:06 has no hits.

BS21370.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:36 Download gff for BS21370.complete
Subject Subject Range Query Range Percent Splice Strand
CG34165-RA 53..350 17..314 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:55:18 Download gff for BS21370.complete
Subject Subject Range Query Range Percent Splice Strand
CG34165-RA 80..377 17..314 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:01 Download gff for BS21370.complete
Subject Subject Range Query Range Percent Splice Strand
CG34165-RA 80..377 17..314 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:01 Download gff for BS21370.complete
Subject Subject Range Query Range Percent Splice Strand
2L 14713927..14714217 23..314 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:55:18 Download gff for BS21370.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 14713927..14714217 23..314 99   Plus

BS21370.pep Sequence

Translation from 16 to 315

> BS21370.pep
MKFTIIVFVALLAFASAQFGPFGQIIRGIERFEGGLQQQQQQQQSGFGGG
QQQQQQEEGVIFRGPFGGGVEFFQEQQQQQQGGGGQQQQQQENLFNFFG*

BS21370.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:00:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG34165-PB 99 CG34165-PB 1..99 1..99 514 100 Plus
CG34165-PA 99 CG34165-PA 1..99 1..99 514 100 Plus
CG31775-PB 89 CG31775-PB 1..87 1..92 183 51.5 Plus
CG31775-PA 89 CG31775-PA 1..87 1..92 183 51.5 Plus
CG42586-PB 89 CG42586-PB 1..87 1..92 183 51.5 Plus