BS21375.complete Sequence
452 bp assembled on 2011-01-18
GenBank Submission: KX800233
> BS21375.complete
GAAGTTATCAGTCGACATGCCAAAAGTGGATGAGTCCCCCATCTTCCGGC
GCAAGCATATAATCAGCGAGGAGCGTTCCGTATCTGTGGATCGCTTCAAG
TACACGCTAAACGATGAGGGAGGCTTCACCAGGTCCGTTCCGCTGGTTCA
GGAGTATCACTACAGGGTGGTATCTCCTTTGGCCAGCCGACCCAGTCAGC
AGCATCCGCATAAGCCGGGATCCGGAGAAGCCCGTTTCGAGCCTCGTCTT
AACCGTCGCTCCTCGGTTCCGATCAGCATTAACTATCAAACGGTGCACGT
ATCGAGTCCACATCCTCCGGAAATGGCCAGGCGCGGCTCGGTGATAAGCC
TCACTGGGCCACCACCAGAAGTCAGTGGTATGCCAAGTGGAGCCGCTGAT
CCAAAGCGGCGCGTCCGCATGATAAATCGCCATTGAAAGCTTTCTAGACC
AT
BS21375.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:03:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34219-RB | 420 | CG34219-PB | 1..420 | 17..436 | 2100 | 100 | Plus |
| CG34219-RA | 420 | CG34219-PA | 1..420 | 17..436 | 2100 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:03:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34219-RB | 643 | CG34219-RB | 63..484 | 16..437 | 2110 | 100 | Plus |
| CG34219-RA | 1111 | CG34219-RA | 63..484 | 16..437 | 2110 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:03:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8918592..8918815 | 239..16 | 1120 | 100 | Minus |
| 2R | 25286936 | 2R | 8918335..8918533 | 437..239 | 995 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:03:35 has no hits.
BS21375.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:08 Download gff for
BS21375.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34219-RA | 156..574 | 17..435 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:50 Download gff for
BS21375.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34219-RA | 64..482 | 17..435 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:55:22 Download gff for
BS21375.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34219-RA | 64..482 | 17..435 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:22 Download gff for
BS21375.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8918337..8918532 | 240..435 | 100 | <- | Minus |
| 2R | 8918592..8918814 | 17..239 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:50 Download gff for
BS21375.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4805842..4806037 | 240..435 | 100 | <- | Minus |
| arm_2R | 4806097..4806319 | 17..239 | 100 | | Minus |
BS21375.pep Sequence
Translation from 16 to 435
> BS21375.pep
MPKVDESPIFRRKHIISEERSVSVDRFKYTLNDEGGFTRSVPLVQEYHYR
VVSPLASRPSQQHPHKPGSGEARFEPRLNRRSSVPISINYQTVHVSSPHP
PEMARRGSVISLTGPPPEVSGMPSGAADPKRRVRMINRH*
BS21375.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:07:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34219-PB | 139 | CG34219-PB | 1..139 | 1..139 | 730 | 100 | Plus |
| CG34219-PA | 139 | CG34219-PA | 1..139 | 1..139 | 730 | 100 | Plus |
