BS21377.complete Sequence
686 bp assembled on 2011-01-18
GenBank Submission: KX800551
> BS21377.complete
GAAGTTATCAGTCGACATGACCAAAGCGAATAAAACGCCGCAAAAAGCAA
GTGAACCGAATATAAATGGTTCCTTCACACCAGTTCGATATTTGGACAGC
CAGCGCCTGCAATCGCCCACGAGTCACGATGCGAATTTAGCCACCTGCAA
AACCAGATTGGAAACAATAGTCAAACAACTCCAGGATAACTACGCTAAAT
GGCAGCTGGCCCATCAGCGGGGCACCTCTATTTGCTATACTATCGAAGCC
AAGAAGACCAAGTGTCTGGAGAAAAGCCAGGATGAAGGCAGCTCCCTTTA
CCCAGATGATCTCCTACTTCCCTGCAACAAGTTGGCCATCATAGCCTCTA
TTTTCGGGGATATCGCAAATAATACAAAGGAGATACTAAGACAACTGAGA
GGCATATTAAAATTACCGGGATCTGCAGCGGATACGATATTCTACAGGTC
CTGGAAGTTGCAGCAATTCGTGGTTTTCGCGAAGGAGCTATCCGAAAGAT
ATGAGAAGGAGGCTCTGGTCAAAATGGAAGTTGCCGGTAACATTGCTCAC
TCGACTGAAAGAAGCCAGCTCATTGCGCACACAACTTTATGGGAATTTCC
CGAGCACGTGGACTCCTATGTCCATCTGGGGTTTCTTCTCCTTGCCGAAG
AAGTCAGTTTAAGGCAATAAAAGCTTTCTAGACCAT
BS21377.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:03:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34174-RA | 654 | CG34174-PA | 1..654 | 17..670 | 3270 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:03:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34174-RA | 720 | CG34174-RA | 47..701 | 17..671 | 3275 | 100 | Plus |
| CG10880-RB | 1282 | CG10880-RB | 1106..1241 | 671..536 | 680 | 100 | Minus |
| CG10880-RA | 1285 | CG10880-RA | 1109..1244 | 671..536 | 680 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:03:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2214438..2214887 | 90..539 | 2250 | 100 | Plus |
| 2L | 23513712 | 2L | 2215013..2215148 | 536..671 | 680 | 100 | Plus |
| 2L | 23513712 | 2L | 2214312..2214384 | 17..89 | 365 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:03:40 has no hits.
BS21377.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:08 Download gff for
BS21377.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34174-RA | 8..659 | 17..668 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:52 Download gff for
BS21377.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34174-RA | 47..698 | 17..668 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:55:24 Download gff for
BS21377.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34174-RA | 47..698 | 17..668 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:24 Download gff for
BS21377.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2215014..2215145 | 537..668 | 100 | | Plus |
| 2L | 2214438..2214884 | 90..536 | 100 | -> | Plus |
| 2L | 2214312..2214384 | 17..89 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:52 Download gff for
BS21377.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2214312..2214384 | 17..89 | 100 | -> | Plus |
| arm_2L | 2214438..2214884 | 90..536 | 100 | -> | Plus |
| arm_2L | 2215014..2215145 | 537..668 | 100 | | Plus |
BS21377.pep Sequence
Translation from 16 to 669
> BS21377.pep
MTKANKTPQKASEPNINGSFTPVRYLDSQRLQSPTSHDANLATCKTRLET
IVKQLQDNYAKWQLAHQRGTSICYTIEAKKTKCLEKSQDEGSSLYPDDLL
LPCNKLAIIASIFGDIANNTKEILRQLRGILKLPGSAADTIFYRSWKLQQ
FVVFAKELSERYEKEALVKMEVAGNIAHSTERSQLIAHTTLWEFPEHVDS
YVHLGFLLLAEEVSLRQ*
BS21377.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:07:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34174-PA | 217 | CG34174-PA | 1..217 | 1..217 | 1117 | 100 | Plus |
