BS21381.complete Sequence
407 bp assembled on 2011-01-18
GenBank Submission: KX806106
> BS21381.complete
GAAGTTATCAGTCGACATGAGACGATGCAAGACAATTCAAATGCTGTTCC
TCTGTTTGATGATGAGAATGCGAGAAAGTCATGAGCGGCCCACGCCGAAA
AATCTGCTGGAACAAATGCTGCCTGCTGACACCTTTGACGTTATCCGGAG
AATACCTCGCTCCGATGAACCCGGTCCGGATGCCAAAGGGGACCTGAAGC
TGTTGCATGCTCCCTGCGAGTTTGACTTGATAAGATACACATCGATTAAC
CACTATCCCATTTATTGCCTGCCCGTCTACACAAATCGGCACGTGAACGA
GGACTGGTATCGACTTTATAGGACCTACGACACCGAGGGATTTGTTTTCG
GGCAGTTTTACGAGCGTCTCCAGCGGTACGAGTTGGACTGAAAGCTTTCT
AGACCAT
BS21381.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:03:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34234-RA | 351 | CG34234-PA | 1..351 | 41..391 | 1755 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:03:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34234-RA | 603 | CG34234-RA | 11..387 | 16..392 | 1885 | 100 | Plus |
| Dh44-R2-RB | 3069 | CG12370-RB | 2018..2349 | 392..61 | 1660 | 100 | Minus |
| Dh44-R2-RB | 3069 | CG12370-RB | 2406..2451 | 61..16 | 230 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:03:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12486935..12487266 | 392..61 | 1660 | 100 | Minus |
| 2R | 25286936 | 2R | 12487323..12487368 | 61..16 | 230 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:03:46 has no hits.
BS21381.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:09 Download gff for
BS21381.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34234-RA | 12..385 | 17..390 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:53 Download gff for
BS21381.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34234-RA | 12..385 | 17..390 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:55:26 Download gff for
BS21381.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34234-RA | 12..385 | 17..390 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:26 Download gff for
BS21381.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12486937..12487265 | 62..390 | 100 | <- | Minus |
| 2R | 12487323..12487367 | 17..61 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:53 Download gff for
BS21381.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8374828..8374872 | 17..61 | 100 | | Minus |
| arm_2R | 8374442..8374770 | 62..390 | 100 | <- | Minus |
BS21381.pep Sequence
Translation from 16 to 390
> BS21381.pep
MRRCKTIQMLFLCLMMRMRESHERPTPKNLLEQMLPADTFDVIRRIPRSD
EPGPDAKGDLKLLHAPCEFDLIRYTSINHYPIYCLPVYTNRHVNEDWYRL
YRTYDTEGFVFGQFYERLQRYELD*
BS21381.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:07:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34234-PA | 116 | CG34234-PA | 1..116 | 9..124 | 640 | 100 | Plus |
| CG30270-PD | 78 | CG30270-PD | 4..70 | 59..124 | 174 | 46.3 | Plus |
| CG30270-PC | 78 | CG30270-PC | 4..70 | 59..124 | 174 | 46.3 | Plus |
