BS21389.complete Sequence
386 bp assembled on 2011-01-18
GenBank Submission: KX805936
> BS21389.complete
GAAGTTATCAGTCGACATGGCGCGTTCCCAGTCGAAAATGATTCGGGCCG
CCATGGTCGTGGACGACCCTAATATGGTGGCCTGGCTGCCATACCTTAAC
TTTCTTCGCTTTCTGAAGCGAAACTTCTATCCCAGGACTGATTTGCGCCG
CTTACTTCAGGTGGGACTCATCCGTTGGATCGCACTTAGCGATGCCCAGA
AGAGGTTATTTGAGCCAGAACGAATCCTGGCGCGTGTGGCTCGCAGGCAA
AGGAATAAACGACGCCGCCGACTACTTCGCCGTGCTCGGCATGGCCAGAA
AGGACGTGGTGCAGTGCGACGCCCCATCTACGACAGCCGTCCTAAACCGC
GACGCCGCAAACCGAAGTAGAAGCTTTCTAGACCAT
BS21389.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:03:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34264-RC | 354 | CG34264-PC | 1..354 | 17..370 | 1770 | 100 | Plus |
CG34264-RB | 354 | CG34264-PB | 1..354 | 17..370 | 1770 | 100 | Plus |
CG34264-RD | 345 | CG34264-PD | 1..339 | 17..371 | 1500 | 95.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:03:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34264-RC | 563 | CG34264-RC | 125..479 | 17..371 | 1775 | 100 | Plus |
CG34264-RB | 587 | CG34264-RB | 122..476 | 17..371 | 1775 | 100 | Plus |
CG34264-RD | 547 | CG34264-RD | 125..463 | 17..371 | 1500 | 95.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:03:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 317208..317411 | 17..220 | 1020 | 100 | Plus |
3L | 28110227 | 3L | 317465..317615 | 221..371 | 755 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:03:30 has no hits.
BS21389.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:07 Download gff for
BS21389.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34264-RB | 122..475 | 17..370 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:48 Download gff for
BS21389.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34264-RB | 122..475 | 17..370 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:55:21 Download gff for
BS21389.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34264-RB | 122..475 | 17..370 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:21 Download gff for
BS21389.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 317208..317411 | 17..220 | 100 | -> | Plus |
3L | 317465..317614 | 221..370 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:48 Download gff for
BS21389.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 317208..317411 | 17..220 | 100 | -> | Plus |
arm_3L | 317465..317614 | 221..370 | 100 | | Plus |
BS21389.pep Sequence
Translation from 16 to 369
> BS21389.pep
MARSQSKMIRAAMVVDDPNMVAWLPYLNFLRFLKRNFYPRTDLRRLLQVG
LIRWIALSDAQKRLFEPERILARVARRQRNKRRRRLLRRARHGQKGRGAV
RRPIYDSRPKPRRRKPK*
BS21389.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:07:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34264-PC | 117 | CG34264-PC | 1..117 | 1..117 | 601 | 100 | Plus |
CG34264-PB | 117 | CG34264-PB | 1..117 | 1..117 | 601 | 100 | Plus |
CG34264-PD | 114 | CG34264-PD | 1..62 | 1..62 | 318 | 100 | Plus |