BS21396.complete Sequence
446 bp assembled on 2011-01-18
GenBank Submission: KX800775
> BS21396.complete
GAAGTTATCAGTCGACATGTCCAATTTGCGGCGCCAGGTTCTCAGTGCTT
TCAAGAAGCTCCACCGTACACGACAATACGTTTTTCAGGGGGATGCCAAT
GCTTTGGCGGCGGGACGACTAAAAATCAACGAATCTTTCCTGCAGAATCG
TAATGAAAGCAGCGAGGATGAAATTCAAAAGATGATCAAGCTGGCGCAGG
ACGTGGATTTGGAGCTGCGAACGAATGTCATCCAAGCCCAGAAAAAAGAG
GATGGTGTTTATGAACTAAGGATCACGCCAGAGACAACGCGACTCGACAA
TGTGGTCTTTAATCCTGACGCAATTATCGAAAAACCGCGCAGGCAACGCG
GCGACAAAAACACTGAAGGTTGCTGCGGTGGCGCTGCGATGGCGGCGCTG
GAAGCCGAAGTCCAGGCCCGCAACAAATAAAAGCTTTCTAGACCAT
BS21396.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:22:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34150-RB | 414 | CG34150-PB | 1..414 | 17..430 | 2070 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:22:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34150-RB | 495 | CG34150-RB | 16..431 | 17..432 | 2080 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:22:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 24814697..24814866 | 263..432 | 850 | 100 | Plus |
3R | 32079331 | 3R | 24814345..24814492 | 34..181 | 740 | 100 | Plus |
3R | 32079331 | 3R | 24814551..24814634 | 180..263 | 420 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:22:30 has no hits.
BS21396.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:30 Download gff for
BS21396.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34150-RB | 16..420 | 17..421 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:55:01 Download gff for
BS21396.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34150-RB | 16..420 | 17..421 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:46 Download gff for
BS21396.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34150-RB | 16..420 | 17..421 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:46 Download gff for
BS21396.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24814698..24814855 | 264..421 | 100 | | Plus |
3R | 24814277..24814297 | 17..37 | 100 | -> | Plus |
3R | 24814349..24814492 | 38..181 | 100 | -> | Plus |
3R | 24814553..24814634 | 182..263 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:55:01 Download gff for
BS21396.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 20639999..20640019 | 17..37 | 100 | -> | Plus |
arm_3R | 20640071..20640214 | 38..181 | 100 | -> | Plus |
arm_3R | 20640275..20640356 | 182..263 | 100 | -> | Plus |
arm_3R | 20640420..20640577 | 264..421 | 100 | | Plus |
BS21396.pep Sequence
Translation from 16 to 429
> BS21396.pep
MSNLRRQVLSAFKKLHRTRQYVFQGDANALAAGRLKINESFLQNRNESSE
DEIQKMIKLAQDVDLELRTNVIQAQKKEDGVYELRITPETTRLDNVVFNP
DAIIEKPRRQRGDKNTEGCCGGAAMAALEAEVQARNK*
BS21396.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:07:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34150-PB | 137 | CG34150-PB | 1..137 | 1..137 | 689 | 100 | Plus |