Clone BS21458 Report

Search the DGRC for BS21458

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:214
Well:58
Vector:pDNR-Dual
Associated Gene/TranscriptCG34251-RA
Protein status:BS21458.pep: full length peptide match
Sequenced Size:590

Clone Sequence Records

BS21458.complete Sequence

590 bp assembled on 2011-01-18

GenBank Submission: KX804029

> BS21458.complete
GAAGTTATCAGTCGACATGGCTGGAATCAGTGGAAGTTCCCAGCCGCGTC
TGCAGCTATATATATTCTTGTGCCTGATGGCGTCGGTGTTTGCTTCATTA
CCGGAGGAACTGAGAGGAGCTGCAGGACCTGAATCGAGAATGGATGTTCT
AGGACTCTCGCCGGGACAAAGAGTCCTGGCTGCAGTGCCTGCGTCAGGAC
GCACGAGTTTTTTGCTGTACCAATTAGCTTTGGCCATAAATTCAGCCGCC
GGCCTGGAATCGCCAACGATGCAGGAAGTGGAGGTGGTCGATGTGGTGGA
GAACCAGGAGCAGTTCCTGCCGGCGAGCCCGGATCCCAACTGGCTGGCCG
CCATGGCGAATGAGTTTCAGAGTGTGCCAGTGTACGAGACCTTTCCGGCG
GACTTGCAGAACTGGCTGATGGATGGCTACGGGATCAGTGCCACGGATTT
CTACCACAGCTGGAGCAGAGCAGGATTTGGCAGGAGGAGCAGCTCCCGCA
CCCAGCTGATCTGTACGGCAGATGGCCAGTGCTATGAGGTCAACAAAATC
GTCACTGCCTGCTGTCCATTTTGAAAGCTTTCTAGACCAT

BS21458.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:24:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG34251-RB 558 CG34251-PB 1..558 17..574 2790 100 Plus
CG34251-RA 558 CG34251-PA 1..558 17..574 2790 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:24:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG34251-RB 804 CG34251-RB 223..780 17..574 2790 100 Plus
CG34251-RA 1059 CG34251-RA 63..620 17..574 2790 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:24:33
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17682933..17683142 365..574 1050 100 Plus
3L 28110227 3L 17673657..17673838 17..198 910 100 Plus
3L 28110227 3L 17677399..17677574 195..370 880 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:24:34 has no hits.

BS21458.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:47 Download gff for BS21458.complete
Subject Subject Range Query Range Percent Splice Strand
CG34251-RB 223..779 17..573 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:55:56 Download gff for BS21458.complete
Subject Subject Range Query Range Percent Splice Strand
CG34251-RA 63..619 17..573 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:40 Download gff for BS21458.complete
Subject Subject Range Query Range Percent Splice Strand
CG34251-RA 63..619 17..573 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:40 Download gff for BS21458.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17673657..17673837 17..197 100 -> Plus
3L 17677402..17677574 198..370 100 -> Plus
3L 17682939..17683141 371..573 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:55:56 Download gff for BS21458.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17666757..17666937 17..197 100 -> Plus
arm_3L 17670502..17670674 198..370 100 -> Plus
arm_3L 17676039..17676241 371..573 100   Plus

BS21458.pep Sequence

Translation from 16 to 573

> BS21458.pep
MAGISGSSQPRLQLYIFLCLMASVFASLPEELRGAAGPESRMDVLGLSPG
QRVLAAVPASGRTSFLLYQLALAINSAAGLESPTMQEVEVVDVVENQEQF
LPASPDPNWLAAMANEFQSVPVYETFPADLQNWLMDGYGISATDFYHSWS
RAGFGRRSSSRTQLICTADGQCYEVNKIVTACCPF*

BS21458.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:01:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG34251-PB 185 CG34251-PB 1..185 1..185 959 100 Plus
CG34251-PA 185 CG34251-PA 1..185 1..185 959 100 Plus