BS21458.complete Sequence
590 bp assembled on 2011-01-18
GenBank Submission: KX804029
> BS21458.complete
GAAGTTATCAGTCGACATGGCTGGAATCAGTGGAAGTTCCCAGCCGCGTC
TGCAGCTATATATATTCTTGTGCCTGATGGCGTCGGTGTTTGCTTCATTA
CCGGAGGAACTGAGAGGAGCTGCAGGACCTGAATCGAGAATGGATGTTCT
AGGACTCTCGCCGGGACAAAGAGTCCTGGCTGCAGTGCCTGCGTCAGGAC
GCACGAGTTTTTTGCTGTACCAATTAGCTTTGGCCATAAATTCAGCCGCC
GGCCTGGAATCGCCAACGATGCAGGAAGTGGAGGTGGTCGATGTGGTGGA
GAACCAGGAGCAGTTCCTGCCGGCGAGCCCGGATCCCAACTGGCTGGCCG
CCATGGCGAATGAGTTTCAGAGTGTGCCAGTGTACGAGACCTTTCCGGCG
GACTTGCAGAACTGGCTGATGGATGGCTACGGGATCAGTGCCACGGATTT
CTACCACAGCTGGAGCAGAGCAGGATTTGGCAGGAGGAGCAGCTCCCGCA
CCCAGCTGATCTGTACGGCAGATGGCCAGTGCTATGAGGTCAACAAAATC
GTCACTGCCTGCTGTCCATTTTGAAAGCTTTCTAGACCAT
BS21458.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:24:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34251-RB | 558 | CG34251-PB | 1..558 | 17..574 | 2790 | 100 | Plus |
CG34251-RA | 558 | CG34251-PA | 1..558 | 17..574 | 2790 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:24:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34251-RB | 804 | CG34251-RB | 223..780 | 17..574 | 2790 | 100 | Plus |
CG34251-RA | 1059 | CG34251-RA | 63..620 | 17..574 | 2790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:24:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 17682933..17683142 | 365..574 | 1050 | 100 | Plus |
3L | 28110227 | 3L | 17673657..17673838 | 17..198 | 910 | 100 | Plus |
3L | 28110227 | 3L | 17677399..17677574 | 195..370 | 880 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:24:34 has no hits.
BS21458.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:47 Download gff for
BS21458.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34251-RB | 223..779 | 17..573 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:55:56 Download gff for
BS21458.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34251-RA | 63..619 | 17..573 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:40 Download gff for
BS21458.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34251-RA | 63..619 | 17..573 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:40 Download gff for
BS21458.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 17673657..17673837 | 17..197 | 100 | -> | Plus |
3L | 17677402..17677574 | 198..370 | 100 | -> | Plus |
3L | 17682939..17683141 | 371..573 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:55:56 Download gff for
BS21458.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 17666757..17666937 | 17..197 | 100 | -> | Plus |
arm_3L | 17670502..17670674 | 198..370 | 100 | -> | Plus |
arm_3L | 17676039..17676241 | 371..573 | 100 | | Plus |
BS21458.pep Sequence
Translation from 16 to 573
> BS21458.pep
MAGISGSSQPRLQLYIFLCLMASVFASLPEELRGAAGPESRMDVLGLSPG
QRVLAAVPASGRTSFLLYQLALAINSAAGLESPTMQEVEVVDVVENQEQF
LPASPDPNWLAAMANEFQSVPVYETFPADLQNWLMDGYGISATDFYHSWS
RAGFGRRSSSRTQLICTADGQCYEVNKIVTACCPF*
BS21458.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:01:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34251-PB | 185 | CG34251-PB | 1..185 | 1..185 | 959 | 100 | Plus |
CG34251-PA | 185 | CG34251-PA | 1..185 | 1..185 | 959 | 100 | Plus |