BS21476.complete Sequence
362 bp assembled on 2011-01-18
GenBank Submission: KX805836
> BS21476.complete
GAAGTTATCAGTCGACATGCATTTGCCCCAAGGAGCATTAAGCTTTCTGT
TCATCACTTGCATGATGTTCGCACTGGCAGGCGGCCATCCATCAAGCGAC
AAGCTGAAGATCCGAATACACGTGCCGGTGAAGCACCACACACATGTACA
CACGAAGACGGTCATTAAGAAGGTTCCGCTGCCCATTCCGGTGCCGGTCA
AGGAGCACCACCACGAGCCGAAGAAGCACCACAGCAGCCGCAGCCATCAC
CATCACCACCACCACGACGACGACCAGGATGACGATTTCGAGGGCTACGA
GTACCCCATCAAGGCCAAGCGGCGCACGCGGCATCCCTTTGTCTGAAAGC
TTTCTAGACCAT
BS21476.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:01:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34221-RC | 330 | CG34221-PC | 1..330 | 17..346 | 1650 | 100 | Plus |
CG34221-RB | 330 | CG34221-PB | 1..330 | 17..346 | 1650 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34221-RC | 1165 | CG34221-RC | 129..458 | 17..346 | 1650 | 100 | Plus |
CG34221-RB | 752 | CG34221-RB | 129..458 | 17..346 | 1650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:00:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10197843..10198080 | 346..109 | 1190 | 100 | Minus |
2R | 25286936 | 2R | 10198372..10198446 | 109..35 | 375 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:01:00 has no hits.
BS21476.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:37:48 Download gff for
BS21476.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34221-RB | 109..437 | 17..345 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:45:42 Download gff for
BS21476.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34221-RB | 109..437 | 17..345 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:22 Download gff for
BS21476.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34221-RB | 129..457 | 17..345 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:22 Download gff for
BS21476.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10197844..10198080 | 109..345 | 100 | <- | Minus |
2R | 10198373..10198446 | 35..108 | 100 | <- | Minus |
2R | 10199566..10199583 | 17..34 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:45:42 Download gff for
BS21476.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6085349..6085585 | 109..345 | 100 | <- | Minus |
arm_2R | 6085878..6085951 | 35..108 | 100 | <- | Minus |
arm_2R | 6087071..6087088 | 17..34 | 100 | | Minus |
BS21476.pep Sequence
Translation from 16 to 345
> BS21476.pep
MHLPQGALSFLFITCMMFALAGGHPSSDKLKIRIHVPVKHHTHVHTKTVI
KKVPLPIPVPVKEHHHEPKKHHSSRSHHHHHHHDDDQDDDFEGYEYPIKA
KRRTRHPFV*
BS21476.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34221-PC | 109 | CG34221-PC | 1..109 | 1..109 | 619 | 100 | Plus |
CG34221-PB | 109 | CG34221-PB | 1..109 | 1..109 | 619 | 100 | Plus |