BS21492.complete Sequence
740 bp assembled on 2011-01-18
GenBank Submission: KX802863
> BS21492.complete
GAAGTTATCAGTCGACATGGATCCAGTTCAACGGGAAAAGGAATTAATTA
AAATGGAATTGCCAAGGACGAGGGTGCTTGTAACCACCAGCAGAGCGGAT
TATGTGGATCATACTGAAAGAGCCGTTTACAATCCCCCGATTAAGAAAAC
CCAAGAGGATCCCTCTCTAATAAGTGGTCACTACTGCGCAAATCTAAAGG
TTGGTGGCATTGAATATAAAACAAAGACATGGCCCCAATCAATGGACTGG
CGGGAGGACTACGCACAGTTCATCAAGCGCAACAAGTGGTGTAACGAAAG
GATCTACAAGCTATTTTTTATGTATCCGCCTGTGGATTTCCGAATTCTGA
AGGACTTTGTGAAGGACCTTCGTAGATCGGTGTACATGAACGATTACTCT
CGGAATGACTTCGTTTCTTTTGTAAGTCGACGGCGCTATAGGAACAAAAA
AGGTTACTCTCTCAAGGACGAGGACTATCGGACCACATATGGGTGCTATT
ACAATTTCCTGCAGGAAACGGAGCCGTTTAGGAGCTCCTTCTATCCAGAA
CGTAGGCTAAAGGACACTACTCTGGACAAAATCGCCAGCGATTTACGAAA
AATTTTCACAAAGTACAACTTGACCACCTATTTTGATACCATATGCGTTC
CGGCCTTGATGAAAGCTAAAAATAATGTAATGCCCTCCACACCCATCGAC
CGGTATCAATTTCGCAAATATTAGAAGCTTTCTAGACCAT
BS21492.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:01:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34287-RA | 708 | CG34287-PA | 1..708 | 17..724 | 3540 | 100 | Plus |
| CG14676-RA | 735 | CG14676-PA | 234..320 | 226..312 | 270 | 87.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34287-RA | 951 | CG34287-RA | 65..772 | 17..724 | 3540 | 100 | Plus |
| CG14676-RA | 958 | CG14676-RA | 312..398 | 226..312 | 270 | 87.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:01:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5853396..5854103 | 17..724 | 3540 | 100 | Plus |
| 3R | 32079331 | 3R | 5847531..5847617 | 226..312 | 270 | 87.4 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:01:10 has no hits.
BS21492.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:37:49 Download gff for
BS21492.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34287-RA | 65..772 | 17..724 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:45:45 Download gff for
BS21492.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34287-RA | 65..772 | 17..724 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:25 Download gff for
BS21492.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34287-RA | 65..772 | 17..724 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:25 Download gff for
BS21492.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5853396..5854103 | 17..724 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:45:45 Download gff for
BS21492.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1679118..1679825 | 17..724 | 100 | | Plus |
BS21492.pep Sequence
Translation from 16 to 723
> BS21492.pep
MDPVQREKELIKMELPRTRVLVTTSRADYVDHTERAVYNPPIKKTQEDPS
LISGHYCANLKVGGIEYKTKTWPQSMDWREDYAQFIKRNKWCNERIYKLF
FMYPPVDFRILKDFVKDLRRSVYMNDYSRNDFVSFVSRRRYRNKKGYSLK
DEDYRTTYGCYYNFLQETEPFRSSFYPERRLKDTTLDKIASDLRKIFTKY
NLTTYFDTICVPALMKAKNNVMPSTPIDRYQFRKY*
BS21492.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34287-PA | 235 | CG34287-PA | 1..235 | 1..235 | 1269 | 100 | Plus |
| CG14676-PA | 244 | CG14676-PA | 7..244 | 2..235 | 619 | 50.6 | Plus |
