Clone BS21501 Report

Search the DGRC for BS21501

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:215
Well:1
Vector:pDNR-Dual
Associated Gene/TranscriptCG34323-RA
Protein status:BS21501.pep: full length peptide match
Sequenced Size:371

Clone Sequence Records

BS21501.complete Sequence

371 bp assembled on 2011-01-18

GenBank Submission: KX803234

> BS21501.complete
GAAGTTATCAGTCGACATGACATTCTATCTGGAACACGTGCTCACTGGCG
ATCGGATTAACTTGAACGAGGGCATCCAAATTCTGGGGCGCCACTCCTCT
TGCACCTGGGTATTGAAGTACGACTATATGTCGAGATATCATGCTCTTAT
TCACGTTAATCAGGGAGACATTTTCATTAAGGAGATGGAAACCAATAATG
GCATATTTCTTAACTATTGGCCGACGCGAATCGGCAGTTCTTGGTGCGAA
GTAAACGTTGGCGACGTCCTGTACTTTGGGGTACAATTAGGCATCGAACA
CGATGGGGAGATACCGAATACGTTCGGAATATTCACCGTTAAATCATCTG
GATAAAAGCTTTCTAGACCAT

BS21501.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:01:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG34323-RA 339 CG34323-PA 1..339 17..355 1695 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG34323-RA 772 CG34323-RA 52..392 17..357 1705 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:01:25
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12070488..12070659 17..188 860 100 Plus
X 23542271 X 12070713..12070883 187..357 855 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:01:26 has no hits.

BS21501.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:37:51 Download gff for BS21501.complete
Subject Subject Range Query Range Percent Splice Strand
CG34323-RA 52..388 17..353 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:45:53 Download gff for BS21501.complete
Subject Subject Range Query Range Percent Splice Strand
CG34323-RA 52..388 17..353 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:32 Download gff for BS21501.complete
Subject Subject Range Query Range Percent Splice Strand
CG34323-RA 52..388 17..353 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:32 Download gff for BS21501.complete
Subject Subject Range Query Range Percent Splice Strand
X 12070488..12070658 17..187 100 -> Plus
X 12070714..12070879 188..353 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:45:53 Download gff for BS21501.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11964521..11964691 17..187 100 -> Plus
arm_X 11964747..11964912 188..353 100   Plus

BS21501.pep Sequence

Translation from 16 to 354

> BS21501.pep
MTFYLEHVLTGDRINLNEGIQILGRHSSCTWVLKYDYMSRYHALIHVNQG
DIFIKEMETNNGIFLNYWPTRIGSSWCEVNVGDVLYFGVQLGIEHDGEIP
NTFGIFTVKSSG*

BS21501.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG34323-PA 112 CG34323-PA 1..112 1..112 612 100 Plus
hog-PA 149 CG32595-PA 1..109 1..110 246 47.3 Plus