Clone BS21503 Report

Search the DGRC for BS21503

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:215
Well:3
Vector:pDNR-Dual
Associated Gene/TranscriptinaF-C-RA
Protein status:BS21503.pep: full length peptide match
Sequenced Size:455

Clone Sequence Records

BS21503.complete Sequence

455 bp assembled on 2011-01-18

GenBank Submission: KX800463

> BS21503.complete
GAAGTTATCAGTCGACATGTCCACTGCGTCAGAATCCGCCAGGGCGGGCC
TGGGCAATGCCGCCAGCATGGCGAATCTTGCCAAGATTGTCAATCTCATC
GAATCGAACGTGAAGAGCGAGGATGTGGAGGTGCTTGAGGAAGCGGTCAG
GGGATCAACCGGAACCGGAAGTGGCAGCAGCGTCCGCTTGGCCAGCAGCA
GTGCCCCGCGTAGAAGTGCCTGTGCCACATCGTATGTCCCCAAGTCACCG
CAGCTGGAGGAGATTGTGTTCGCAGAGCCCACGTATACCGAGCGATTTGC
CCGATACTTTGTGATCGTGATCTATTTGTGCGGGCTCTGCAGCCTGGGAT
TCTTTCTGTCCATCTACCACATCTTCTTCTGGGATTCACGCATGCCACCC
GTTTACAAGGGCCAGAAGAAGGGGCCTGCCTTCGGCTAGAAGCTTTCTAG
ACCAT

BS21503.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:01:36
Subject Length Description Subject Range Query Range Score Percent Strand
inaF-C-RA 423 CG34321-PA 1..423 17..439 2115 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:37
Subject Length Description Subject Range Query Range Score Percent Strand
inaF-C-RA 1590 CG34321-RA 120..543 17..440 2120 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:01:34
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11731223..11731646 440..17 2120 100 Minus
Blast to na_te.dros performed on 2014-11-26 16:01:35 has no hits.

BS21503.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:37:52 Download gff for BS21503.complete
Subject Subject Range Query Range Percent Splice Strand
inaF-C-RA 120..542 17..439 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:45:57 Download gff for BS21503.complete
Subject Subject Range Query Range Percent Splice Strand
inaF-C-RA 120..542 17..439 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:36 Download gff for BS21503.complete
Subject Subject Range Query Range Percent Splice Strand
inaF-C-RA 120..542 17..439 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:36 Download gff for BS21503.complete
Subject Subject Range Query Range Percent Splice Strand
X 11731224..11731646 17..439 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:45:57 Download gff for BS21503.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11625257..11625679 17..439 100   Minus

BS21503.pep Sequence

Translation from 16 to 438

> BS21503.pep
MSTASESARAGLGNAASMANLAKIVNLIESNVKSEDVEVLEEAVRGSTGT
GSGSSVRLASSSAPRRSACATSYVPKSPQLEEIVFAEPTYTERFARYFVI
VIYLCGLCSLGFFLSIYHIFFWDSRMPPVYKGQKKGPAFG*

BS21503.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:17
Subject Length Description Subject Range Query Range Score Percent Strand
inaF-C-PA 140 CG34321-PA 1..140 1..140 710 100 Plus