BS21505.complete Sequence
629 bp assembled on 2011-01-18
GenBank Submission: KX805727
> BS21505.complete
GAAGTTATCAGTCGACATGAAATTCCGCTTCTGTGGCGAAGGCGATTGCC
CCGATTGGGTCCTAGCTGAGATCATATCAACACTCTCGAACTTGAGCATT
GAAAACTTGGAACAACTTAGCGATTTAGTGGCACAACGAATTTGTGGAGA
GACATTTGAGGAAGCGAAAATAAAATCGCTGACATCCACATTAACTAATG
AAGGAAAAACCGCCGTGGCATGCATCAATTTTATGCTGACCAGCGCAGCT
CGCTATAGCTGTAGTGAAAGCATTTTTGGCGAGGAGATCCAGCAATTGGG
ACTTCCCAAGGACCATGCCGCAGCCATGTGCAGAGTCCTCCAAAAGCATT
CCGCCACCATAAGGCAAACACTTATAAACAAATCTTTCAGAATTAACGAA
CTGACAAGCGTCCGAGACATATCTACGCCAGGGCAAACGCCTCCAAACTA
CGCCACCTTGGAACTGAAGATCTCGCAAGAACTGGTCGATGGCCTACCGA
AGGATACCACCCATGTCCTCAACATTGATCGCACCCAAATGAAGGCTCTG
CTGGCGGAGCTGAAATTGGCACGTGATGTTATGCAAAAATATGAAAATAA
ACCAGATTCCTAAAAGCTTTCTAGACCAT
BS21505.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:01:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34039-RB | 597 | CG34039-PB | 1..597 | 17..613 | 2985 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34039-RB | 699 | CG34039-RB | 87..685 | 17..615 | 2995 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:01:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 14562046..14562283 | 155..392 | 1175 | 99.6 | Plus |
3L | 28110227 | 3L | 14562377..14562599 | 393..615 | 1115 | 100 | Plus |
3L | 28110227 | 3L | 14561858..14562000 | 19..161 | 715 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:01:39 has no hits.
BS21505.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:37:53 Download gff for
BS21505.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34039-RB | 87..681 | 17..611 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:45:59 Download gff for
BS21505.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34039-RB | 87..681 | 17..611 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:38 Download gff for
BS21505.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34039-RB | 87..681 | 17..611 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:38 Download gff for
BS21505.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14561857..14561999 | 17..160 | 99 | -> | Plus |
3L | 14562052..14562283 | 161..392 | 100 | -> | Plus |
3L | 14562377..14562595 | 393..611 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:45:59 Download gff for
BS21505.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 14555477..14555695 | 393..611 | 100 | | Plus |
arm_3L | 14554957..14555099 | 17..160 | 99 | -> | Plus |
arm_3L | 14555152..14555383 | 161..392 | 100 | -> | Plus |
BS21505.pep Sequence
Translation from 16 to 612
> BS21505.pep
MKFRFCGEGDCPDWVLAEIISTLSNLSIENLEQLSDLVAQRICGETFEEA
KIKSLTSTLTNEGKTAVACINFMLTSAARYSCSESIFGEEIQQLGLPKDH
AAAMCRVLQKHSATIRQTLINKSFRINELTSVRDISTPGQTPPNYATLEL
KISQELVDGLPKDTTHVLNIDRTQMKALLAELKLARDVMQKYENKPDS*
BS21505.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34039-PB | 198 | CG34039-PB | 1..198 | 1..198 | 1006 | 100 | Plus |