Clone BS21505 Report

Search the DGRC for BS21505

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:215
Well:5
Vector:pDNR-Dual
Associated Gene/TranscriptCG34039-RB
Protein status:BS21505.pep: full length peptide match
Sequenced Size:629

Clone Sequence Records

BS21505.complete Sequence

629 bp assembled on 2011-01-18

GenBank Submission: KX805727

> BS21505.complete
GAAGTTATCAGTCGACATGAAATTCCGCTTCTGTGGCGAAGGCGATTGCC
CCGATTGGGTCCTAGCTGAGATCATATCAACACTCTCGAACTTGAGCATT
GAAAACTTGGAACAACTTAGCGATTTAGTGGCACAACGAATTTGTGGAGA
GACATTTGAGGAAGCGAAAATAAAATCGCTGACATCCACATTAACTAATG
AAGGAAAAACCGCCGTGGCATGCATCAATTTTATGCTGACCAGCGCAGCT
CGCTATAGCTGTAGTGAAAGCATTTTTGGCGAGGAGATCCAGCAATTGGG
ACTTCCCAAGGACCATGCCGCAGCCATGTGCAGAGTCCTCCAAAAGCATT
CCGCCACCATAAGGCAAACACTTATAAACAAATCTTTCAGAATTAACGAA
CTGACAAGCGTCCGAGACATATCTACGCCAGGGCAAACGCCTCCAAACTA
CGCCACCTTGGAACTGAAGATCTCGCAAGAACTGGTCGATGGCCTACCGA
AGGATACCACCCATGTCCTCAACATTGATCGCACCCAAATGAAGGCTCTG
CTGGCGGAGCTGAAATTGGCACGTGATGTTATGCAAAAATATGAAAATAA
ACCAGATTCCTAAAAGCTTTCTAGACCAT

BS21505.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:01:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG34039-RB 597 CG34039-PB 1..597 17..613 2985 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG34039-RB 699 CG34039-RB 87..685 17..615 2995 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:01:38
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14562046..14562283 155..392 1175 99.6 Plus
3L 28110227 3L 14562377..14562599 393..615 1115 100 Plus
3L 28110227 3L 14561858..14562000 19..161 715 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:01:39 has no hits.

BS21505.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:37:53 Download gff for BS21505.complete
Subject Subject Range Query Range Percent Splice Strand
CG34039-RB 87..681 17..611 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:45:59 Download gff for BS21505.complete
Subject Subject Range Query Range Percent Splice Strand
CG34039-RB 87..681 17..611 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:38 Download gff for BS21505.complete
Subject Subject Range Query Range Percent Splice Strand
CG34039-RB 87..681 17..611 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:38 Download gff for BS21505.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14561857..14561999 17..160 99 -> Plus
3L 14562052..14562283 161..392 100 -> Plus
3L 14562377..14562595 393..611 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:45:59 Download gff for BS21505.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14555477..14555695 393..611 100   Plus
arm_3L 14554957..14555099 17..160 99 -> Plus
arm_3L 14555152..14555383 161..392 100 -> Plus

BS21505.pep Sequence

Translation from 16 to 612

> BS21505.pep
MKFRFCGEGDCPDWVLAEIISTLSNLSIENLEQLSDLVAQRICGETFEEA
KIKSLTSTLTNEGKTAVACINFMLTSAARYSCSESIFGEEIQQLGLPKDH
AAAMCRVLQKHSATIRQTLINKSFRINELTSVRDISTPGQTPPNYATLEL
KISQELVDGLPKDTTHVLNIDRTQMKALLAELKLARDVMQKYENKPDS*

BS21505.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG34039-PB 198 CG34039-PB 1..198 1..198 1006 100 Plus