BS21507.complete Sequence
671 bp assembled on 2011-01-18
GenBank Submission: KX803142
> BS21507.complete
GAAGTTATCAGTCGACATGTTTTTAAACGATATAGGCCAGCCCTTAATAC
TGGAAAAAGGAAAAGTCTACAGTTCCTACGAGGAGCACCGTGGACCCTTG
CTCTTCACGTCAGCCGCCTTAGGAGATCTAATAGCACCACAAAATTGGTG
CCAGTTAGCTGTGGGTTCGCAGCTGGACATCTCACGGCTGCAATCACATG
CAGATGTTTCAGAAAGCTGCACTTTTGAAATACTACTGCCGAATAAGCCC
ACCCGACTAGTGTACGATGAAAACGAGATCACAATCACATTGATACCAGC
AGGAAGAAAGGAAAACGGCTTGGAGTGCAACCTATTCTACATAGAAAACG
GCCATGCACGATATTTAATTGTGGACTGCCTATCTGGGTATCTGGACTTT
CTGCCAAAGGCTTCGGGCTCCCTTCACACGGGCCTCTGTCAGGGAATCGA
TGTACTGTACGTGGACGAAGAGCTATTAGCTGAGAACCAAATAAACGAGG
ATCTTTACAGTTTGGTTGACCTGATAAGACCAAAGTTCATATACGGGTTG
CGGCAGTGGGAACTGCCGAAGTGGCTGCTCGATCTGCGTCAGATTGATGA
TAGAAATAAGAAGTATAGCGTGCTTTCCGTACAAAATGATGCATTTAAGG
TTTAAAAGCTTTCTAGACCAT
BS21507.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:01:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34008-RA | 639 | CG34008-PA | 1..639 | 17..655 | 3195 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34008-RA | 715 | CG34008-RA | 23..663 | 17..657 | 3205 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:01:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20580735..20581044 | 657..348 | 1550 | 100 | Minus |
| 3R | 32079331 | 3R | 20581113..20581376 | 347..84 | 1320 | 100 | Minus |
| 3R | 32079331 | 3R | 20581432..20581500 | 85..17 | 345 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:01:47 has no hits.
BS21507.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:37:54 Download gff for
BS21507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34008-RA | 31..659 | 25..653 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:04 Download gff for
BS21507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34008-RA | 31..659 | 25..653 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:42 Download gff for
BS21507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34008-RA | 31..659 | 25..653 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:42 Download gff for
BS21507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20580739..20581044 | 348..653 | 100 | <- | Minus |
| 3R | 20581113..20581374 | 86..347 | 100 | <- | Minus |
| 3R | 20581432..20581492 | 25..85 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:04 Download gff for
BS21507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16406461..16406766 | 348..653 | 100 | <- | Minus |
| arm_3R | 16406835..16407096 | 86..347 | 100 | <- | Minus |
| arm_3R | 16407154..16407214 | 25..85 | 100 | | Minus |
BS21507.pep Sequence
Translation from 16 to 654
> BS21507.pep
MFLNDIGQPLILEKGKVYSSYEEHRGPLLFTSAALGDLIAPQNWCQLAVG
SQLDISRLQSHADVSESCTFEILLPNKPTRLVYDENEITITLIPAGRKEN
GLECNLFYIENGHARYLIVDCLSGYLDFLPKASGSLHTGLCQGIDVLYVD
EELLAENQINEDLYSLVDLIRPKFIYGLRQWELPKWLLDLRQIDDRNKKY
SVLSVQNDAFKV*
BS21507.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34008-PA | 212 | CG34008-PA | 1..212 | 1..212 | 1110 | 100 | Plus |
