BS21509.complete Sequence
482 bp assembled on 2011-01-18
GenBank Submission: KX805797
> BS21509.complete
GAAGTTATCAGTCGACATGCCCATTGTAGTAAAAACACAAAACGCTGGCA
AAGGCGATTGGGCCATTATAGAGCTGCAAGGCGACCTGGAGGTGCGGAGC
AACCAGGATATGCACGGCCAGTTTATTGGCGATCTCTACTACAATAAATA
TGGCCAACCTATTCTCATCATTGGACATCACATTCTTCAGGGACGTGAAC
AAAAGTTGGATAAACCATTTGCGGTGCTGGAAAAGTCCAAGACCAATGAG
GGAGAACGACTCCTAGAAACGAGCATGGCCTCGCAGGATGTCAGTATGCT
GAACGCCACCACGGGAGCGGAGCGCACAGTGCTGGATCATACGATCGCCC
AGGAGCACAAGAGTCGCCAAAGAACGGAGTACACTGTGCGCGCCGTTTGC
ACCAAAAAATTAATCTTCAAATCGCGACCCAAACCAATTATAGCCAATGT
AGCTAAATCCGTTTAGAAGCTTTCTAGACCAT
BS21509.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:01:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34001-RB | 450 | CG34001-PB | 1..450 | 17..466 | 2250 | 100 | Plus |
| CG34001-RC | 420 | CG34001-PC | 145..420 | 191..466 | 1380 | 100 | Plus |
| CG34001-RC | 420 | CG34001-PC | 1..144 | 17..160 | 720 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34001-RB | 587 | CG34001-RB | 98..547 | 17..466 | 2250 | 100 | Plus |
| CG34001-RC | 557 | CG34001-RC | 242..517 | 191..466 | 1380 | 100 | Plus |
| CG34001-RC | 557 | CG34001-RC | 98..241 | 17..160 | 720 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:01:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10634267..10634572 | 161..466 | 1530 | 100 | Plus |
| 3L | 28110227 | 3L | 10634075..10634198 | 37..160 | 620 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:01:52 has no hits.
BS21509.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:37:55 Download gff for
BS21509.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34001-RB | 78..527 | 17..466 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:05 Download gff for
BS21509.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34001-RB | 98..547 | 17..466 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:44 Download gff for
BS21509.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34001-RB | 98..547 | 17..466 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:44 Download gff for
BS21509.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10631176..10631195 | 17..36 | 100 | -> | Plus |
| 3L | 10634075..10634198 | 37..160 | 100 | -> | Plus |
| 3L | 10634267..10634572 | 161..466 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:05 Download gff for
BS21509.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10624276..10624295 | 17..36 | 100 | -> | Plus |
| arm_3L | 10627175..10627298 | 37..160 | 100 | -> | Plus |
| arm_3L | 10627367..10627672 | 161..466 | 100 | | Plus |
BS21509.pep Sequence
Translation from 16 to 465
> BS21509.pep
MPIVVKTQNAGKGDWAIIELQGDLEVRSNQDMHGQFIGDLYYNKYGQPIL
IIGHHILQGREQKLDKPFAVLEKSKTNEGERLLETSMASQDVSMLNATTG
AERTVLDHTIAQEHKSRQRTEYTVRAVCTKKLIFKSRPKPIIANVAKSV*
BS21509.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34001-PB | 149 | CG34001-PB | 1..149 | 1..149 | 762 | 100 | Plus |
| CG34001-PC | 139 | CG34001-PC | 1..139 | 1..149 | 690 | 93.3 | Plus |
