BS21510.complete Sequence
611 bp assembled on 2011-01-18
GenBank Submission: KX800708
> BS21510.complete
GAAGTTATCAGTCGACATGTCGAAAACAAATGAAACTTGTATAAATGGTG
ACATCGCGCTGGAGAAAGAAGAATCACTTATCGATATTAGTAGCAGTTCT
CTGGAGGCTCAGCCAAATTTAAGCACTTCGGAATTGGAGACAATTGTGAG
AAACGCCGTTAAACAGATTCCAACACCTCCAAACTATGTCGACGTAACTG
TGAATAGCATTGCAAATGCTATTCTGCCCAAAATATTAAACAAATATGAT
ACGATCGAAATGAAGGTTGAGAATATCCAAAAATCCCTGGACACTTATAG
TCGGCAAGCGGAAGCAGTGGATCAAGACATAGCTGAAATATTTTTGGATT
TGCACACTATTTATAATAGGATCGAAAAACTCGATAAAAGTGGCAGTAAG
TTATGCAGCGCGAAAAAGGCAATTTTATTAAGACATGTTAAGAAGTCTGA
AGACTTACTGAACCAGTCGCGCCATTATCTCACAAACGATCCCAAAGAGT
TGAGTGCCCATCTTGTTGGTCCACCAACGGAAGTCCCATCGATTCAAAAG
GAGCACACAGCAAACTCGGACGGCAGGACGACAGGAAGTATCTAAAAGCT
TTCTAGACCAT
BS21510.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:01:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33308-RA | 579 | CG33308-PA | 1..579 | 17..595 | 2895 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33308-RA | 909 | CG33308-RA | 105..684 | 17..596 | 2900 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:01:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 14802438..14802972 | 17..551 | 2675 | 100 | Plus |
2L | 23513712 | 2L | 14803020..14803068 | 548..596 | 245 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:01:14 has no hits.
BS21510.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:37:50 Download gff for
BS21510.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33308-RA | 105..681 | 17..593 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:45:47 Download gff for
BS21510.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33308-RA | 105..681 | 17..593 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:27 Download gff for
BS21510.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33308-RA | 105..681 | 17..593 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:27 Download gff for
BS21510.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 14802438..14802971 | 17..550 | 100 | -> | Plus |
2L | 14803023..14803065 | 551..593 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:45:47 Download gff for
BS21510.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 14802438..14802971 | 17..550 | 100 | -> | Plus |
arm_2L | 14803023..14803065 | 551..593 | 100 | | Plus |
BS21510.pep Sequence
Translation from 16 to 594
> BS21510.pep
MSKTNETCINGDIALEKEESLIDISSSSLEAQPNLSTSELETIVRNAVKQ
IPTPPNYVDVTVNSIANAILPKILNKYDTIEMKVENIQKSLDTYSRQAEA
VDQDIAEIFLDLHTIYNRIEKLDKSGSKLCSAKKAILLRHVKKSEDLLNQ
SRHYLTNDPKELSAHLVGPPTEVPSIQKEHTANSDGRTTGSI*
BS21510.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33308-PA | 192 | CG33308-PA | 1..192 | 1..192 | 963 | 100 | Plus |