Clone BS21510 Report

Search the DGRC for BS21510

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:215
Well:10
Vector:pDNR-Dual
Associated Gene/TranscriptCG33308-RA
Protein status:BS21510.pep: full length peptide match
Sequenced Size:611

Clone Sequence Records

BS21510.complete Sequence

611 bp assembled on 2011-01-18

GenBank Submission: KX800708

> BS21510.complete
GAAGTTATCAGTCGACATGTCGAAAACAAATGAAACTTGTATAAATGGTG
ACATCGCGCTGGAGAAAGAAGAATCACTTATCGATATTAGTAGCAGTTCT
CTGGAGGCTCAGCCAAATTTAAGCACTTCGGAATTGGAGACAATTGTGAG
AAACGCCGTTAAACAGATTCCAACACCTCCAAACTATGTCGACGTAACTG
TGAATAGCATTGCAAATGCTATTCTGCCCAAAATATTAAACAAATATGAT
ACGATCGAAATGAAGGTTGAGAATATCCAAAAATCCCTGGACACTTATAG
TCGGCAAGCGGAAGCAGTGGATCAAGACATAGCTGAAATATTTTTGGATT
TGCACACTATTTATAATAGGATCGAAAAACTCGATAAAAGTGGCAGTAAG
TTATGCAGCGCGAAAAAGGCAATTTTATTAAGACATGTTAAGAAGTCTGA
AGACTTACTGAACCAGTCGCGCCATTATCTCACAAACGATCCCAAAGAGT
TGAGTGCCCATCTTGTTGGTCCACCAACGGAAGTCCCATCGATTCAAAAG
GAGCACACAGCAAACTCGGACGGCAGGACGACAGGAAGTATCTAAAAGCT
TTCTAGACCAT

BS21510.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:01:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG33308-RA 579 CG33308-PA 1..579 17..595 2895 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG33308-RA 909 CG33308-RA 105..684 17..596 2900 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:01:13
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 14802438..14802972 17..551 2675 100 Plus
2L 23513712 2L 14803020..14803068 548..596 245 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:01:14 has no hits.

BS21510.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:37:50 Download gff for BS21510.complete
Subject Subject Range Query Range Percent Splice Strand
CG33308-RA 105..681 17..593 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:45:47 Download gff for BS21510.complete
Subject Subject Range Query Range Percent Splice Strand
CG33308-RA 105..681 17..593 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:27 Download gff for BS21510.complete
Subject Subject Range Query Range Percent Splice Strand
CG33308-RA 105..681 17..593 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:27 Download gff for BS21510.complete
Subject Subject Range Query Range Percent Splice Strand
2L 14802438..14802971 17..550 100 -> Plus
2L 14803023..14803065 551..593 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:45:47 Download gff for BS21510.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 14802438..14802971 17..550 100 -> Plus
arm_2L 14803023..14803065 551..593 100   Plus

BS21510.pep Sequence

Translation from 16 to 594

> BS21510.pep
MSKTNETCINGDIALEKEESLIDISSSSLEAQPNLSTSELETIVRNAVKQ
IPTPPNYVDVTVNSIANAILPKILNKYDTIEMKVENIQKSLDTYSRQAEA
VDQDIAEIFLDLHTIYNRIEKLDKSGSKLCSAKKAILLRHVKKSEDLLNQ
SRHYLTNDPKELSAHLVGPPTEVPSIQKEHTANSDGRTTGSI*

BS21510.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG33308-PA 192 CG33308-PA 1..192 1..192 963 100 Plus