BS21512.complete Sequence
632 bp assembled on 2011-01-18
GenBank Submission: KX802808
> BS21512.complete
GAAGTTATCAGTCGACATGAGTAATTTAAAATCGGACCTGGATGAATACT
TGCTACTGCAGAGTGATCAGAAGAAACCAAGTTTCAACGTCAAGTTGCCA
CAGCTGAAAGTTCCATTTTTCTCCAGCTCCGACCCAGAAGCAAATAGTTT
TCTGAAAGATAGCGACTCATGTTTTCCAAAATTGTCTCGCCTGCAGCGAA
TCGTGGGCTTCGTGGCCTGTTTAGGAATGGGCGCATTGTGCATGACCCTT
TCCACGTTCTACATTCCCTTCCTAATATTGAAGGCCAGAAAGTTTGCCTT
GCTCTACACCCTTGGCAGCCTCTTTTTCATTTTGAGCTTTTGCTTTCTCT
CCGGATTTGGATCCTTTTTAAAGCAAATGTTTTCCAAACCAAGACTGCTC
ACCTCGCTTTCATATAGTTCCTGTTTGATTTTAACCTTATACTGCGCCTT
GGTGGCCAAAAGCACCGCATTTACAGTCCTTTTTGCAGTGGCGCAAATAA
TTGCATTGCTCTTTATGGTCCTGGGCACTGTCCCTGGGGGAGCTACGGGG
CTCAAGTTCTTCGGACAACTCTTCAAGAACACCGTTTCCGCTTCAACAAG
TGTACTGCCTGTATGAAAGCTTTCTAGACCAT
BS21512.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:01:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33635-RA | 600 | CG33635-PA | 1..600 | 17..616 | 3000 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33635-RA | 769 | CG33635-RA | 62..662 | 17..617 | 3005 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:01:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 157943..158376 | 617..184 | 2170 | 100 | Minus |
| 2L | 23513712 | 2L | 158436..158603 | 184..17 | 840 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:01:22 has no hits.
BS21512.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:37:51 Download gff for
BS21512.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33635-RA | 62..660 | 17..615 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:45:51 Download gff for
BS21512.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33635-RA | 62..660 | 17..615 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:30 Download gff for
BS21512.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33635-RA | 62..660 | 17..615 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:30 Download gff for
BS21512.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 157945..158375 | 185..615 | 100 | <- | Minus |
| 2L | 158436..158603 | 17..184 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:45:51 Download gff for
BS21512.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 157945..158375 | 185..615 | 100 | <- | Minus |
| arm_2L | 158436..158603 | 17..184 | 100 | | Minus |
BS21512.pep Sequence
Translation from 16 to 615
> BS21512.pep
MSNLKSDLDEYLLLQSDQKKPSFNVKLPQLKVPFFSSSDPEANSFLKDSD
SCFPKLSRLQRIVGFVACLGMGALCMTLSTFYIPFLILKARKFALLYTLG
SLFFILSFCFLSGFGSFLKQMFSKPRLLTSLSYSSCLILTLYCALVAKST
AFTVLFAVAQIIALLFMVLGTVPGGATGLKFFGQLFKNTVSASTSVLPV*
BS21512.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33635-PA | 199 | CG33635-PA | 1..199 | 1..199 | 997 | 100 | Plus |
| CG5104-PB | 163 | CG5104-PB | 15..154 | 40..180 | 170 | 31.2 | Plus |
