BS21514.complete Sequence
536 bp assembled on 2011-01-18
GenBank Submission: KX805770
> BS21514.complete
GAAGTTATCAGTCGACATGGACAACGGACCGATGGATGCCACGCCCACTG
CCGCCGCCTTCCGGCTGATTTTGCTTAGCAAATCGAATCCCGTGATGGGT
TGCTACATGTTCTGGACCAGTCTGCTCGTGCTGAAGATGCTCGTTATGTC
ACTACTCACCGCCCGCCAGCGCATGAAAACCAAGACCTATGCCAACCCAG
AGGATTTACGCCTGAGTCGGAGCACGGAGGTTCGATTCGGGGATCCCAAT
GTGGAACGAGTTCGTCGTGCTCATCGCAACGACCTAGAGAACATTTTGCC
CTTTCTTCTGATGTCGCTGGCCTATGTGGCCAGCGGACCGAATCCCCTGA
CCGCCCGTCTGCTCATCCGGATCGGTGCAAGTGCCCGGCTGATCCACACG
GTGGTCTACGCCATCATCCCGGTTCCGCAGCCAGCAAGAGCCCTGGCCTT
CTTCACCACCTTCGCCATCACCTGCTTCGAGGCGGGCTACGTGCTCGTCT
GCTGTATCAAGTACATTTAGAAGCTTTCTAGACCAT
BS21514.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:02:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33177-RA | 504 | CG33177-PA | 1..504 | 17..520 | 2520 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:02:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33177-RA | 862 | CG33177-RA | 178..687 | 12..521 | 2535 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:02:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15081940..15082194 | 267..521 | 1275 | 100 | Plus |
| X | 23542271 | X | 15081544..15081799 | 12..267 | 1265 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:02:10 has no hits.
BS21514.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:37:57 Download gff for
BS21514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33177-RA | 1..504 | 17..520 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:15 Download gff for
BS21514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33177-RA | 183..686 | 17..520 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:51 Download gff for
BS21514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33177-RA | 183..686 | 17..520 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:51 Download gff for
BS21514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15081549..15081799 | 17..267 | 100 | -> | Plus |
| X | 15081941..15082193 | 268..520 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:15 Download gff for
BS21514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14975582..14975832 | 17..267 | 100 | -> | Plus |
| arm_X | 14975974..14976226 | 268..520 | 100 | | Plus |
BS21514.pep Sequence
Translation from 16 to 519
> BS21514.pep
MDNGPMDATPTAAAFRLILLSKSNPVMGCYMFWTSLLVLKMLVMSLLTAR
QRMKTKTYANPEDLRLSRSTEVRFGDPNVERVRRAHRNDLENILPFLLMS
LAYVASGPNPLTARLLIRIGASARLIHTVVYAIIPVPQPARALAFFTTFA
ITCFEAGYVLVCCIKYI*
BS21514.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33177-PA | 167 | CG33177-PA | 1..167 | 1..167 | 852 | 100 | Plus |
| CG33178-PC | 165 | CG33178-PC | 18..165 | 19..167 | 405 | 52.3 | Plus |
| CG33178-PA | 165 | CG33178-PA | 18..165 | 19..167 | 405 | 52.3 | Plus |
| Mgstl-PA | 152 | CG1742-PA | 7..147 | 19..160 | 402 | 58.5 | Plus |
| CG33178-PB | 177 | CG33178-PB | 18..177 | 19..167 | 383 | 49.1 | Plus |
