Clone BS21515 Report

Search the DGRC for BS21515

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:215
Well:15
Vector:pDNR-Dual
Associated Gene/TranscriptCG13028-RA
Protein status:BS21515.pep: full length peptide match
Sequenced Size:590

Clone Sequence Records

BS21515.complete Sequence

590 bp assembled on 2011-01-18

GenBank Submission: KX802514

> BS21515.complete
GAAGTTATCAGTCGACATGCAGTTCATCTATTTGACGCTGGCATTGGGGC
TGATCTTCACCACTGCCCTTCAGGCGGCCATTATACCACTGACCCTGATC
AAAAACGGAATTGAAGCGAATTCCCAAGCACTTCCCACGGATACGGAGAA
GTTCGGTTACCTGGAATTCAAACCCAATGGATCACTAATACTCAGAAGGG
CGCCCAATCAGAGTGGCAGTAACCTACAGGACCTGGTAATGCTGAGAGGA
GTTCTTCAGGCTCTGAAAGCGAGTCCCTCGAAAATGTCGGACATCGGTGG
CGAAACGCGATTGAGCCTAAGGATTTATGGAGATGGAGTGGAACACAAGT
TTCCGCCCATACTGGAGAATATCATTCAACGCATTCAAACGTATTTTTCG
GTTTATCGCTTTACGGATACAAGCAAACCCGGTGGATTGCAGCGAATTGA
ACTTACTACACAGCCGCCGGATGATTCTCCGGATGTAACCACTGCAAAAG
CCGAGAACGATGATGAACTGATAGCAGTCGGTGAGCAGGACGCGTACATT
ACAGTGGGGGATGATACAGACTAGAAGCTTTCTAGACCAT

BS21515.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:02:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG13028-RA 558 CG13028-PA 1..558 17..574 2790 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:02:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG13028-RA 743 CG13028-RA 76..639 13..576 2805 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:02:13
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16923327..16923890 13..576 2805 99.8 Plus
Blast to na_te.dros performed on 2014-11-26 16:02:14 has no hits.

BS21515.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:37:58 Download gff for BS21515.complete
Subject Subject Range Query Range Percent Splice Strand
CG13028-RA 80..637 17..574 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:16 Download gff for BS21515.complete
Subject Subject Range Query Range Percent Splice Strand
CG13028-RA 80..637 17..574 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:53 Download gff for BS21515.complete
Subject Subject Range Query Range Percent Splice Strand
CG13028-RA 80..637 17..574 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:53 Download gff for BS21515.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16923331..16923888 17..574 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:16 Download gff for BS21515.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16916431..16916988 17..574 100   Plus

BS21515.pep Sequence

Translation from 16 to 573

> BS21515.pep
MQFIYLTLALGLIFTTALQAAIIPLTLIKNGIEANSQALPTDTEKFGYLE
FKPNGSLILRRAPNQSGSNLQDLVMLRGVLQALKASPSKMSDIGGETRLS
LRIYGDGVEHKFPPILENIIQRIQTYFSVYRFTDTSKPGGLQRIELTTQP
PDDSPDVTTAKAENDDELIAVGEQDAYITVGDDTD*

BS21515.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG13028-PA 185 CG13028-PA 1..185 1..185 935 100 Plus