BS21516.complete Sequence
407 bp assembled on 2011-01-18
GenBank Submission: KX800843
> BS21516.complete
GAAGTTATCAGTCGACATGAAGTCCAAACAAGTCTTTTACATCGCCTTCA
GCTTGCTTCTGCTGGGATCCTTGCTGCCAAACGAAGTGGAGTCCTTAAGA
GTAGATCTTAATAAGCTGGCGGAGTGCACAGAATCGGGATTGAAAGTAGC
CACAACGTTGCTCGTGAGGGCGATACCATGTGTAAAAAAATTGGCAAAAT
GTGCTGACTTTCGAGCCATTAAGACTAAGGACCTTGATATTACCGCACTT
GCCCTCTTGGGCTATCAATATCTGCAAACGGTCGTGAACAACCAAAGATG
TCTATTGATCTCATTGAAAGAAGGCTACGACGCTGTGTCGCCACACCTTG
ACAAACTTATTAGTGGCAAGTGCCTACCAGGGCTCAGCTAAAAGCTTTCT
AGACCAT
BS21516.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:02:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Acp53C14c-RB | 375 | CG33530-PB | 1..375 | 17..391 | 1875 | 100 | Plus |
Acp53C14c-RA | 375 | CG33530-PA | 1..375 | 17..391 | 1875 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:02:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Acp53C14c-RB | 511 | CG33530-RB | 109..485 | 16..392 | 1885 | 100 | Plus |
Acp53C14c-RA | 564 | CG33530-RA | 162..538 | 16..392 | 1885 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:02:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16750802..16751135 | 392..59 | 1670 | 100 | Minus |
2R | 25286936 | 2R | 16751193..16751235 | 58..16 | 215 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:02:18 has no hits.
BS21516.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:37:59 Download gff for
BS21516.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Acp53C14c-RA | 137..509 | 17..389 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:17 Download gff for
BS21516.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Acp53C14c-RA | 137..509 | 17..389 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:54 Download gff for
BS21516.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Acp53C14c-RA | 163..535 | 17..389 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:54 Download gff for
BS21516.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16750805..16751135 | 59..389 | 100 | <- | Minus |
2R | 16751193..16751234 | 17..58 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:17 Download gff for
BS21516.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12638310..12638640 | 59..389 | 100 | <- | Minus |
arm_2R | 12638698..12638739 | 17..58 | 100 | | Minus |
BS21516.pep Sequence
Translation from 16 to 390
> BS21516.pep
MKSKQVFYIAFSLLLLGSLLPNEVESLRVDLNKLAECTESGLKVATTLLV
RAIPCVKKLAKCADFRAIKTKDLDITALALLGYQYLQTVVNNQRCLLISL
KEGYDAVSPHLDKLISGKCLPGLS*
BS21516.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Acp53C14c-PB | 124 | CG33530-PB | 1..124 | 1..124 | 619 | 100 | Plus |
Acp53C14c-PA | 124 | CG33530-PA | 1..124 | 1..124 | 619 | 100 | Plus |