Clone BS21517 Report

Search the DGRC for BS21517

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:215
Well:17
Vector:pDNR-Dual
Associated Gene/TranscriptCG14488-RA
Protein status:BS21517.pep: full length peptide match
Sequenced Size:437

Clone Sequence Records

BS21517.complete Sequence

437 bp assembled on 2011-01-18

GenBank Submission: KX802016

> BS21517.complete
GAAGTTATCAGTCGACATGGTTGATCGTGGAAATAATTTGGTACTCCCAG
TGGGCCCATGTTCAACGGAACTAACGGAATCTCAAGCGAGTTTTGCTCCA
CCCAAAATTAAGAAAGTGCTCCCCACTAGAGCAAATCGCATGGAACAGTT
TCTATGGCAGGAACTCTTTGCCGAATACAACCGACAGGCCTCCGCCCAAG
TGGATTTGGGTGAGGATCGCACGGAGTACTACGACCAGTTCTGCAAGGAT
GTGCCACCGAAAAACGAAGAGACCGAGGAAGTTCTGGTCAACAAGTATCC
ACTTTACTGCACTACTGCCGTAACAGTATGGAATCACGAGGGAGATTTCA
CCAAGACTTTCAAAAGAAAATATTCTATTACCAGACCTATAGATCTGTGT
CCTGATAAGTTTGCACTTTAGAAGCTTTCTAGACCAT

BS21517.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:02:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG14488-RA 405 CG14488-PA 1..405 17..421 2025 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:02:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG14488-RA 569 CG14488-RA 63..468 17..422 2030 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:02:22
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17767266..17767565 422..123 1500 100 Minus
2R 25286936 2R 17767619..17767724 122..17 530 100 Minus
Blast to na_te.dros performed on 2014-11-26 16:02:23 has no hits.

BS21517.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:37:59 Download gff for BS21517.complete
Subject Subject Range Query Range Percent Splice Strand
CG14488-RA 35..439 17..421 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:19 Download gff for BS21517.complete
Subject Subject Range Query Range Percent Splice Strand
CG14488-RA 63..467 17..421 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:56 Download gff for BS21517.complete
Subject Subject Range Query Range Percent Splice Strand
CG14488-RA 63..467 17..421 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:56 Download gff for BS21517.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17767267..17767565 123..421 100 <- Minus
2R 17767619..17767724 17..122 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:19 Download gff for BS21517.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13654772..13655070 123..421 100 <- Minus
arm_2R 13655124..13655229 17..122 100   Minus

BS21517.pep Sequence

Translation from 16 to 420

> BS21517.pep
MVDRGNNLVLPVGPCSTELTESQASFAPPKIKKVLPTRANRMEQFLWQEL
FAEYNRQASAQVDLGEDRTEYYDQFCKDVPPKNEETEEVLVNKYPLYCTT
AVTVWNHEGDFTKTFKRKYSITRPIDLCPDKFAL*

BS21517.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG14488-PA 134 CG14488-PA 1..134 1..134 722 100 Plus