Clone BS21521 Report

Search the DGRC for BS21521

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:215
Well:21
Vector:pDNR-Dual
Associated Gene/TranscriptCG32213-RB
Protein status:BS21521.pep: gold
Sequenced Size:422

Clone Sequence Records

BS21521.complete Sequence

422 bp assembled on 2011-01-18

GenBank Submission: KX806236

> BS21521.complete
GAAGTTATCAGTCGACATGTTCAAATACGCTGTCGTCGTTCTCGCTCTCG
TTGCCTGCGCTGCTGCCAAGCCTGGACTCCTGGGTGCTCCCCTTGCTTAC
ACTGCTCCTCTGGCTTACTCTGCTCCTGCTGCCGTGGTAGCTGCTCCCGC
TCCAGTTGTGACCGCAACCAGTAGCCAGGTTATCGCCAGGAATTACAATG
GAATCGCCTCTGCTCCTGTGATTGCTCCCGTTGCTGCTCCTCTGGCTGCT
CCTGTGGTGGCGAAGTACGCGGCTACTCCTCTGGCTGCTCCTGTGGTGGC
GAAGTACGCGGCTACTCCTCTGGCTGCACGACTGGCCTACTCCTCGCCTT
TGGCTTACTCCGCACCACTGAGCTACGCTGCTGCTCCTGCACCATTTCTC
ATCTAAAAGCTTTCTAGACCAT

BS21521.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:02:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG32213-RB 390 CG32213-PB 1..390 17..406 1950 100 Plus
825-Oak-RB 390 CG32208-PB 1..390 17..406 1920 99.5 Plus
CG32214-RC 351 CG32214-PC 1..272 17..288 1330 99.3 Plus
CG32213-RB 390 CG32213-PB 217..272 272..327 265 98.2 Plus
CG32213-RB 390 CG32213-PB 256..311 233..288 265 98.2 Plus
825-Oak-RB 390 CG32208-PB 217..272 272..327 265 98.2 Plus
825-Oak-RB 390 CG32208-PB 256..311 233..288 265 98.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:02:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG32213-RB 526 CG32213-RB 51..442 16..407 1960 100 Plus
825-Oak-RB 514 CG32208-RB 51..442 16..407 1930 99.5 Plus
CG32214-RC 756 CG32214-RC 54..326 16..288 1335 99.3 Plus
CG32213-RB 526 CG32213-RB 268..323 272..327 265 98.2 Plus
CG32213-RB 526 CG32213-RB 307..362 233..288 265 98.2 Plus
825-Oak-RB 514 CG32208-RB 268..323 272..327 265 98.2 Plus
825-Oak-RB 514 CG32208-RB 307..362 233..288 265 98.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:02:31
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19475961..19476339 29..407 1895 100 Plus
3L 28110227 3L 19471728..19472106 407..29 1865 99.5 Minus
3L 28110227 3L 19467471..19467730 29..288 1270 99.2 Plus
3L 28110227 3L 19472620..19472994 39..407 1070 86.3 Plus
3L 28110227 3L 19475153..19475447 327..39 745 84.4 Minus
3L 28110227 3L 19466728..19466952 245..39 685 88 Minus
3L 28110227 3L 19467675..19467810 272..407 515 91.9 Plus
3L 28110227 3L 19423906..19424044 88..226 485 89.9 Plus
3L 28110227 3L 19478430..19478568 88..226 485 89.9 Plus
3L 28110227 3L 19423106..19423298 247..54 320 78.9 Minus
3L 28110227 3L 19488102..19488245 88..240 280 80.4 Plus
3L 28110227 3L 19488045..19488123 49..127 275 89.9 Plus
3L 28110227 3L 19477668..19477760 407..315 270 86 Minus
3L 28110227 3L 19424757..19424836 141..220 265 88.8 Plus
3L 28110227 3L 19471808..19471863 288..233 265 98.2 Minus
3L 28110227 3L 19471847..19471902 327..272 265 98.2 Minus
3L 28110227 3L 19476165..19476220 272..327 265 98.2 Plus
3L 28110227 3L 19476204..19476259 233..288 265 98.2 Plus
3L 28110227 3L 19423004..19423102 378..279 255 86 Minus
3L 28110227 3L 19475123..19475209 318..232 255 86.2 Minus
3L 28110227 3L 19486827..19486933 378..271 250 84.3 Minus
3L 28110227 3L 19472858..19472914 232..288 240 94.7 Plus
3L 28110227 3L 19478373..19478428 49..104 205 91.1 Plus
3L 28110227 3L 19486877..19486968 288..197 205 81.5 Minus
3L 28110227 3L 19423849..19423904 49..104 190 89.3 Plus
Blast to na_te.dros performed 2014-11-26 16:02:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2777..2891 159..42 151 60.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2764..2999 258..30 143 57.1 Minus

BS21521.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:00 Download gff for BS21521.complete
Subject Subject Range Query Range Percent Splice Strand
CG32213-RB 57..439 22..404 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:23 Download gff for BS21521.complete
Subject Subject Range Query Range Percent Splice Strand
CG32213-RB 36..418 22..404 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:59 Download gff for BS21521.complete
Subject Subject Range Query Range Percent Splice Strand
CG32213-RB 57..439 22..404 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:59 Download gff for BS21521.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19475956..19476336 22..404 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:23 Download gff for BS21521.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19469056..19469436 22..404 98   Plus

BS21521.pep Sequence

Translation from 16 to 405

> BS21521.pep
MFKYAVVVLALVACAAAKPGLLGAPLAYTAPLAYSAPAAVVAAPAPVVTA
TSSQVIARNYNGIASAPVIAPVAAPLAAPVVAKYAATPLAAPVVAKYAAT
PLAARLAYSSPLAYSAPLSYAAAPAPFLI*

BS21521.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG32213-PB 129 CG32213-PB 1..129 1..129 626 100 Plus
825-Oak-PB 129 CG32208-PB 1..129 1..129 623 99.2 Plus
CG12519-PB 131 CG12519-PB 1..131 1..129 525 85.2 Plus
CG12519-PA 131 CG12519-PA 1..131 1..129 525 85.2 Plus
CG32214-PC 116 CG32214-PC 1..116 1..129 520 86.8 Plus