Clone BS21523 Report

Search the DGRC for BS21523

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:215
Well:23
Vector:pDNR-Dual
Associated Gene/TranscriptCG14870-RA
Protein status:BS21523.pep: full length peptide match
Sequenced Size:758

Clone Sequence Records

BS21523.complete Sequence

758 bp assembled on 2011-01-18

GenBank Submission: KX806531

> BS21523.complete
GAAGTTATCAGTCGACATGAGCGCCAGCGAAGGCATCAGTCTCCCGGGCA
ACGAGGAAACCACTCCGCCGCATGAAAAACATAAACAAAAGGCCAAGAAG
GCCAAAAAGAAGTCCCGGAGTGCCAAAGAAAGTGTTCCCAATGCAATGGA
CGCGAAAGCCACTGCCAGCTACTTTAGTTTGAGCATCGTGGGCCAAATAG
TCTCGGCCACCTTTCCCCTGGGTCCCGACAAGGAGTTCGTCTTCCTGCGC
TACGAAATGGTCGCTGGTCCCGACTGGCAGCTGTCCTCCGGACCCCAGCA
CGGACTCACCCAGCTGGCCACCAATAGAAGGGGCCATTTCAACGAACCGA
TTGTCTTCAATATGCCCATCGAGGTGACCTACAAGAGCACCAGTCCATAT
GGCTGGCCACAGATCCTGGTGACCGTGTTCGGACGCAGTGGCCTGGGCAG
GGAGACACTACTCGGTTACGCTCACATCCACCTGCCCGTTTTCGGCAGTC
GTCGTCCAGCGGATCAGACGGAGCAGCTGCAGGCGCCCATCCTGATGCCC
AAGTGCCCCAACATGATGGCGGACATCACCAGTTGGCTGCTGCGCCGCGA
GCCGGAGCTGAAGGACCCCAAAGTGCTGCTGGACAACCTGAAGTGCAAGG
GACTCTCTATGGAGTCGTACGGCAGCCTACAGTTTCAGCTGTCCTCCGTG
ATGAGGGGCGCCCGCAAGCTGGGCTACCATTGGCACTCCTGAAAGCTTTC
TAGACCAT

BS21523.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:02:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG14870-RA 726 CG14870-PA 1..726 17..742 3630 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:02:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG14870-RA 881 CG14870-RA 101..827 16..742 3635 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:02:00
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15482006..15482395 16..405 1950 100 Plus
3R 32079331 3R 15482513..15482850 405..742 1690 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:02:01 has no hits.

BS21523.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:37:56 Download gff for BS21523.complete
Subject Subject Range Query Range Percent Splice Strand
CG14870-RA 102..826 17..741 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:10 Download gff for BS21523.complete
Subject Subject Range Query Range Percent Splice Strand
CG14870-RA 102..826 17..741 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:47 Download gff for BS21523.complete
Subject Subject Range Query Range Percent Splice Strand
CG14870-RA 102..826 17..741 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:47 Download gff for BS21523.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15482007..15482394 17..404 100 -> Plus
3R 15482513..15482849 405..741 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:10 Download gff for BS21523.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11307729..11308116 17..404 100 -> Plus
arm_3R 11308235..11308571 405..741 100   Plus

BS21523.pep Sequence

Translation from 16 to 741

> BS21523.pep
MSASEGISLPGNEETTPPHEKHKQKAKKAKKKSRSAKESVPNAMDAKATA
SYFSLSIVGQIVSATFPLGPDKEFVFLRYEMVAGPDWQLSSGPQHGLTQL
ATNRRGHFNEPIVFNMPIEVTYKSTSPYGWPQILVTVFGRSGLGRETLLG
YAHIHLPVFGSRRPADQTEQLQAPILMPKCPNMMADITSWLLRREPELKD
PKVLLDNLKCKGLSMESYGSLQFQLSSVMRGARKLGYHWHS*

BS21523.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG14870-PA 241 CG14870-PA 1..241 1..241 1270 100 Plus