Clone BS21524 Report

Search the DGRC for BS21524

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:215
Well:24
Vector:pDNR-Dual
Associated Gene/TranscriptCG33285-RA
Protein status:BS21524.pep: full length peptide match
Sequenced Size:704

Clone Sequence Records

BS21524.complete Sequence

704 bp assembled on 2011-01-18

GenBank Submission: KX805829

> BS21524.complete
GAAGTTATCAGTCGACATGGATGCTTCAGTCAAAGAGGAGTATGCTCGTG
TTTCGCATCCCAATCGCCAGCGTGAATTGGCCAAGAAGCGTCTTCTCTTC
TGGGCAGGACGTCTACAGATGATGCCTCACGAGGTGGAAGGGATGTCTGA
TGGGGAGCTCAACCTTAGGTTTGAAAACGTAAAGAGGAAGGAAGCAGCAT
TTGAGCAGCGAAAAATTGACTTTGAGCGCTGGGCAGAACTCAACCAGTTG
AGATACCTCATGTACGAAGAGCAGAGAAAGTACAATGAGCGTTACGGACA
CGGTGGACCCTCCATCTGGCGCATCCTGGCCATGGCCCAGCAGGATCTGG
AGGAGAAGCTCCAAATAGATCAACTGCGAGGAAGTTGCCAGCGTTTTCCC
TCACCCATGTCTCTAATGGAAGAACGACATAGTGGCGGAAGGCAACGGTT
TCTGGAACCAGTGAGATCTAGCCTATGTGGCTGTATTTCTGATTCAGATG
ATGATCTGGAACTGAGAACTGATCCCAACTCAGAAAGATATAAAGATAGC
TTATTACCCTTTTTCAACGAATATTGCAATCCTCATGCGAAAAGCGAAGA
CTCCTTCAAAAGTAATGGGGAATCTTCAAATCTGGGCTTTTGTCCTCTCT
GCAACAAGAAACACCTGCGCTTGCCACCTCCTTTCTGAAAGCTTTCTAGA
CCAT

BS21524.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:02:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG33285-RA 672 CG33285-PA 1..672 17..688 3360 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:02:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG33285-RA 767 CG33285-RA 56..727 17..688 3360 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:02:04
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21088263..21088934 688..17 3360 100 Minus
Blast to na_te.dros performed on 2014-11-26 16:02:05 has no hits.

BS21524.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:37:57 Download gff for BS21524.complete
Subject Subject Range Query Range Percent Splice Strand
CG33285-RA 56..726 17..687 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:12 Download gff for BS21524.complete
Subject Subject Range Query Range Percent Splice Strand
CG33285-RA 56..726 17..687 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:49 Download gff for BS21524.complete
Subject Subject Range Query Range Percent Splice Strand
CG33285-RA 56..726 17..687 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:49 Download gff for BS21524.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21088264..21088934 17..687 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:12 Download gff for BS21524.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21081364..21082034 17..687 100   Minus

BS21524.pep Sequence

Translation from 16 to 687

> BS21524.pep
MDASVKEEYARVSHPNRQRELAKKRLLFWAGRLQMMPHEVEGMSDGELNL
RFENVKRKEAAFEQRKIDFERWAELNQLRYLMYEEQRKYNERYGHGGPSI
WRILAMAQQDLEEKLQIDQLRGSCQRFPSPMSLMEERHSGGRQRFLEPVR
SSLCGCISDSDDDLELRTDPNSERYKDSLLPFFNEYCNPHAKSEDSFKSN
GESSNLGFCPLCNKKHLRLPPPF*

BS21524.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG33285-PA 223 CG33285-PA 1..223 1..223 1198 100 Plus