BS21527.complete Sequence
551 bp assembled on 2011-01-18
GenBank Submission: KX803435
> BS21527.complete
GAAGTTATCAGTCGACATGACAACATCTGCTGTTGAAGCTCCCAATAGTG
CATATCCCGATTTAGAAAAGCGACTGGAAAGGTATTTGCGAAGTGTGTTT
TGCCTAAAGGAAATCGATACTAAAAATGAGTACATTCCAACCGAAGTGGA
GTACTTTGGAGTTCTGAGTTTAAGCGATGTTCGAGCGCCTCGCCGAAAAC
TGTGGTACATGTACTATGCGACAACAGATCAGGTGGACAAAACTGTGGAT
CAGATCCATCGTAAATATGGCCAAAAGAATATGTACGAGCTGTTCAGAAA
ACCGGTATATACAGGGGCTGGAATGCGATCCCGTGTTAAGAACCACTTTA
AAGGGCTTAAGTGGCACGTAAAAGGAAACATTTTGGAAGCCCCGCTAGGT
AGCTCCCTTAATGATGAGAAAGTGGTTAACACAATTGCAGATTTATATCA
GAACGAAAGGAGAAGATACTTCGATTACCTTATGTCTAGGAGTAATCTGT
ATAAATCGTGTACATATCGAAACATAAATGCATAAAAGCTTTCTAGACCA
T
BS21527.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:02:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33468-RA | 519 | CG33468-PA | 1..519 | 17..535 | 2595 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:02:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33468-RA | 607 | CG33468-RA | 22..542 | 17..537 | 2605 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:02:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14606372..14606861 | 537..48 | 2450 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 16:02:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gypsy | 7469 | gypsy DMGYPF1A 7469bp Derived from M12927 (g157583) (Rel. 44, Last updated, Version 6). | 2326..2364 | 108..146 | 105 | 74.4 | Plus |
BS21527.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:03 Download gff for
BS21527.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33468-RA | 3..519 | 17..533 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:33 Download gff for
BS21527.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33468-RA | 22..538 | 17..533 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:55:08 Download gff for
BS21527.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33468-RA | 22..538 | 17..533 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:08 Download gff for
BS21527.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14606376..14606861 | 48..533 | 100 | <- | Minus |
| 2R | 14606929..14606959 | 17..47 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:33 Download gff for
BS21527.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10493881..10494366 | 48..533 | 100 | <- | Minus |
| arm_2R | 10494434..10494464 | 17..47 | 100 | | Minus |
BS21527.pep Sequence
Translation from 16 to 534
> BS21527.pep
MTTSAVEAPNSAYPDLEKRLERYLRSVFCLKEIDTKNEYIPTEVEYFGVL
SLSDVRAPRRKLWYMYYATTDQVDKTVDQIHRKYGQKNMYELFRKPVYTG
AGMRSRVKNHFKGLKWHVKGNILEAPLGSSLNDEKVVNTIADLYQNERRR
YFDYLMSRSNLYKSCTYRNINA*
BS21527.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33468-PA | 172 | CG33468-PA | 1..172 | 1..172 | 910 | 100 | Plus |
| CG12868-PB | 167 | CG12868-PB | 1..160 | 1..159 | 405 | 47.5 | Plus |
| CG33469-PB | 160 | CG33469-PB | 1..141 | 16..156 | 294 | 36.2 | Plus |
| CG33469-PA | 160 | CG33469-PA | 1..141 | 16..156 | 294 | 36.2 | Plus |
