Clone BS21531 Report

Search the DGRC for BS21531

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:215
Well:31
Vector:pDNR-Dual
Associated Gene/TranscriptCG17650-RA
Protein status:BS21531.pep: full length peptide match
Sequenced Size:410

Clone Sequence Records

BS21531.complete Sequence

410 bp assembled on 2011-01-18

GenBank Submission: KX803333

> BS21531.complete
GAAGTTATCAGTCGACATGAGTGATTTGGTAGGTATCGTTTATAATGACT
ATCCCATGGAGAGCGAGGAGGATTTCAATAGGCGCAGGAGGGATCTTGAT
AATATATTTTTCAACTGCAGCACAAGGAAAAATCAGGAACAACAATTCGA
AGCCAAGCGTCCCATACTAAACTCATCGAACTACAATAAGATATTCGGAG
CATCTTTGGGAGATGACATGGACTTCGAGGACTTTCCCGACCTCAACCAA
CCACTGCCAAATATTTCCATTCACGAGCAACTGCGTCTGGCTTCCGGGAA
CCGCGAGATAATCGCGAGCATTCAGCGAAATCACCAAAAGCGACTCGAAA
ACCTTTGGCACTCGGAACTAATAGAAAAACTAGCGCAAGAGTAAAAGCTT
TCTAGACCAT

BS21531.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:18:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG17650-RA 378 CG17650-PA 1..378 17..394 1890 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:18:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG17650-RA 534 CG17650-RA 42..423 17..398 1910 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:18:16
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 1758397..1758660 398..135 1320 100 Minus
2L 23513712 2L 1758932..1759052 137..17 605 100 Minus
Blast to na_te.dros performed on 2014-11-26 16:18:16 has no hits.

BS21531.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:57 Download gff for BS21531.complete
Subject Subject Range Query Range Percent Splice Strand
CG17650-RA 27..402 17..392 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:53:09 Download gff for BS21531.complete
Subject Subject Range Query Range Percent Splice Strand
CG17650-RA 42..417 17..392 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:58 Download gff for BS21531.complete
Subject Subject Range Query Range Percent Splice Strand
CG17650-RA 42..417 17..392 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:58 Download gff for BS21531.complete
Subject Subject Range Query Range Percent Splice Strand
2L 1758403..1758658 137..392 100 <- Minus
2L 1758933..1759052 17..136 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:53:09 Download gff for BS21531.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 1758403..1758658 137..392 100 <- Minus
arm_2L 1758933..1759052 17..136 100   Minus

BS21531.pep Sequence

Translation from 16 to 393

> BS21531.pep
MSDLVGIVYNDYPMESEEDFNRRRRDLDNIFFNCSTRKNQEQQFEAKRPI
LNSSNYNKIFGASLGDDMDFEDFPDLNQPLPNISIHEQLRLASGNREIIA
SIQRNHQKRLENLWHSELIEKLAQE*

BS21531.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG17650-PA 125 CG17650-PA 1..125 1..125 655 100 Plus