BS21531.complete Sequence
410 bp assembled on 2011-01-18
GenBank Submission: KX803333
> BS21531.complete
GAAGTTATCAGTCGACATGAGTGATTTGGTAGGTATCGTTTATAATGACT
ATCCCATGGAGAGCGAGGAGGATTTCAATAGGCGCAGGAGGGATCTTGAT
AATATATTTTTCAACTGCAGCACAAGGAAAAATCAGGAACAACAATTCGA
AGCCAAGCGTCCCATACTAAACTCATCGAACTACAATAAGATATTCGGAG
CATCTTTGGGAGATGACATGGACTTCGAGGACTTTCCCGACCTCAACCAA
CCACTGCCAAATATTTCCATTCACGAGCAACTGCGTCTGGCTTCCGGGAA
CCGCGAGATAATCGCGAGCATTCAGCGAAATCACCAAAAGCGACTCGAAA
ACCTTTGGCACTCGGAACTAATAGAAAAACTAGCGCAAGAGTAAAAGCTT
TCTAGACCAT
BS21531.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:18:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17650-RA | 378 | CG17650-PA | 1..378 | 17..394 | 1890 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:18:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17650-RA | 534 | CG17650-RA | 42..423 | 17..398 | 1910 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:18:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 1758397..1758660 | 398..135 | 1320 | 100 | Minus |
2L | 23513712 | 2L | 1758932..1759052 | 137..17 | 605 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:18:16 has no hits.
BS21531.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:57 Download gff for
BS21531.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17650-RA | 27..402 | 17..392 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:53:09 Download gff for
BS21531.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17650-RA | 42..417 | 17..392 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:58 Download gff for
BS21531.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17650-RA | 42..417 | 17..392 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:58 Download gff for
BS21531.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1758403..1758658 | 137..392 | 100 | <- | Minus |
2L | 1758933..1759052 | 17..136 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:53:09 Download gff for
BS21531.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 1758403..1758658 | 137..392 | 100 | <- | Minus |
arm_2L | 1758933..1759052 | 17..136 | 100 | | Minus |
BS21531.pep Sequence
Translation from 16 to 393
> BS21531.pep
MSDLVGIVYNDYPMESEEDFNRRRRDLDNIFFNCSTRKNQEQQFEAKRPI
LNSSNYNKIFGASLGDDMDFEDFPDLNQPLPNISIHEQLRLASGNREIIA
SIQRNHQKRLENLWHSELIEKLAQE*
BS21531.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17650-PA | 125 | CG17650-PA | 1..125 | 1..125 | 655 | 100 | Plus |