BS21532.complete Sequence
518 bp assembled on 2011-01-18
GenBank Submission: KX805520
> BS21532.complete
GAAGTTATCAGTCGACATGTATTTTGGCAAAGTAATTTCACTGTTTCTAT
TTTGTTTTCTGTTGGGAGGCATTTGGGCTCAGGATGTTATACCAGAGATA
CCAGAAGATGTTAGGCCAACGGAGCCCACGACAACTACAACAACAGATGC
CACAAGAACCTCTACAACAAAATCCACCACAACTACAACAACGGAACCCA
CCACAACCACTTCAACAACGAAACCCATCACGACTTCAACAACACAAAGG
CCTCCCTTTGAGCAACCCACACGGACAACCGAGATTCCTGGGGTGTGGAT
GCAACCGATAGAAAGATGCTTTCTGAGAAATCAGATGAAGTATAATACTT
GCTGGCCAGTCCCACCGAGGGCCACTTGTTATCGCTGCTGCTACTACTAC
GACAGCCATATCACCGAATGTAGTAAGCTCCACCAAGGGCCTTGTGTGGC
GTATGATTATGGCCAACTGAAAGTGCACGTAAATTGGAAACAAGTATTGT
AAAAGCTTTCTAGACCAT
BS21532.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:18:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34054-RA | 486 | CG34054-PA | 1..486 | 17..502 | 2430 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:18:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34054-RA | 545 | CG34054-RA | 16..503 | 17..504 | 2440 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:18:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11410089..11410423 | 351..17 | 1675 | 100 | Minus |
| 2R | 25286936 | 2R | 11409852..11410005 | 504..351 | 770 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:18:21 has no hits.
BS21532.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:57 Download gff for
BS21532.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34054-RA | 16..499 | 17..500 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:53:11 Download gff for
BS21532.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34054-RA | 16..499 | 17..500 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:00 Download gff for
BS21532.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34054-RA | 16..499 | 17..500 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:00 Download gff for
BS21532.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11409856..11410005 | 351..500 | 100 | <- | Minus |
| 2R | 11410090..11410423 | 17..350 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:53:11 Download gff for
BS21532.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7297361..7297510 | 351..500 | 100 | <- | Minus |
| arm_2R | 7297595..7297928 | 17..350 | 100 | | Minus |
BS21532.pep Sequence
Translation from 16 to 501
> BS21532.pep
MYFGKVISLFLFCFLLGGIWAQDVIPEIPEDVRPTEPTTTTTTDATRTST
TKSTTTTTTEPTTTTSTTKPITTSTTQRPPFEQPTRTTEIPGVWMQPIER
CFLRNQMKYNTCWPVPPRATCYRCCYYYDSHITECSKLHQGPCVAYDYGQ
LKVHVNWKQVL*
BS21532.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34054-PA | 161 | CG34054-PA | 1..161 | 1..161 | 900 | 100 | Plus |
| CG30026-PB | 228 | CG30026-PB | 10..219 | 14..150 | 249 | 34.1 | Plus |
| CG6912-PA | 433 | CG6912-PA | 90..164 | 34..101 | 161 | 50 | Plus |
| CG6912-PA | 433 | CG6912-PA | 90..156 | 29..91 | 150 | 52.2 | Plus |
| Muc96D-PA | 881 | CG31439-PA | 631..685 | 34..88 | 149 | 58.2 | Plus |
| CG6912-PA | 433 | CG6912-PA | 106..165 | 35..91 | 148 | 56.7 | Plus |
| CG43798-PA | 213 | CG43798-PA | 129..191 | 26..87 | 146 | 50.8 | Plus |
