BS21534.complete Sequence
311 bp assembled on 2011-01-18
GenBank Submission: KX801603
> BS21534.complete
GAAGTTATCAGTCGACATGGCGGCTGCCAACATGGAGAAGGGTGAGCTGA
TGAACCAGGTGAAACAACAGATCGCATTGGCCAATGCCCAGGAGATGCTC
TCGAAGATGACGGAGAAGTGCTTCAAGAAGTGCATCCAGAAGCCGGGAAA
ATCACTGGACTCCACCGAGCAGCGTTGCATTTCGCAGTGCATGGATCGCT
TCATGGACGCCTGGAATCTGGTGTCGCGCACCTATGGCAATCGTCTGCAG
CGTGAACAGTACAGGACCATGGAATCGTTGGAGATGACCAGCTAGAAGCT
TTCTAGACCAT
BS21534.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:02:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tim13-RA | 279 | CG11611-PA | 1..279 | 17..295 | 1395 | 100 | Plus |
CG34132-RA | 255 | CG34132-PA | 17..200 | 33..216 | 260 | 76.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:02:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tim13-RA | 442 | CG11611-RA | 86..368 | 13..295 | 1400 | 99.6 | Plus |
CG34132-RA | 535 | CG34132-RA | 163..346 | 33..216 | 260 | 76.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:02:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11774134..11774416 | 295..13 | 1400 | 99.6 | Minus |
2L | 23513712 | 2L | 7885665..7885781 | 33..149 | 210 | 78.6 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:02:37 has no hits.
BS21534.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:01 Download gff for
BS21534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tim13-RA | 90..368 | 17..295 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:25 Download gff for
BS21534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tim13-RA | 90..368 | 17..295 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:55:01 Download gff for
BS21534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tim13-RA | 90..368 | 17..295 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:01 Download gff for
BS21534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11774134..11774412 | 17..295 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:25 Download gff for
BS21534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11767234..11767512 | 17..295 | 100 | | Minus |
BS21534.pep Sequence
Translation from 16 to 294
> BS21534.pep
MAAANMEKGELMNQVKQQIALANAQEMLSKMTEKCFKKCIQKPGKSLDST
EQRCISQCMDRFMDAWNLVSRTYGNRLQREQYRTMESLEMTS*
BS21534.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tim13-PA | 92 | CG11611-PA | 1..92 | 1..92 | 475 | 100 | Plus |
CG34132-PA | 84 | CG34132-PA | 1..81 | 1..81 | 350 | 76.5 | Plus |
CG42302-PA | 121 | CG42302-PA | 8..77 | 12..81 | 185 | 48.6 | Plus |