BS21535.complete Sequence
704 bp assembled on 2011-01-18
GenBank Submission: KX803970
> BS21535.complete
GAAGTTATCAGTCGACATGTTCAAGTATTGTTTTATATGCGTCATTCTAG
CCTGGGCTTCTCGTGATGTTCTCGCTAACAAAACGGAAAATCCGCTGCTA
ATTGATCAAGTGGCTATAAATCAACAACAATGGTTCACATTCATTGCGCT
GAAGGAAAGTGAAATGCAACAGAAAATAGTGAGGATCGAAAGATCGATAG
AAGAACGATTGATGGCCATGCAAAGCAAGTTGGCATACGCACTGAACGAG
CTGCAGACCATAATGGGCAACCAGAGTGTGGAGACTCTCGAGAAACTACG
AATCTCGCACAGGATTAATCCGGCGCTTTTCCAGAGAATGGGCACAAGAC
GCTTCTACATTGAGAAGGAAAACAAACAAAATTGGTTTGGCGCCTCAAAC
ACCTGTCGTCAATTGGGCGGTCACATTGCCACCATCAGGGATGAGCAGGA
GTTTAATGAGATCTTCTCAAGAGCGCCGGCCGGCGTCTTTTGGATAGATA
TGAATGCTATGTTCAAGAACGGCCTTTTTGCATCATCACTCACCGGCAGA
TCGCCGCCGTTCTTTAAGTGGAAGAAAGAAGAAAGGGGCAATAAGTTCGA
TTGCGTTAATGTATACAACAAGGAAATGTACAATGAAAATTGTTTCAACA
CCCATTTGTTCATATGTCAAGCCGAGCAGTGGGATTGAAAGCTTTCTAGA
CCAT
BS21535.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:02:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-30A-RA | 672 | CG17011-PA | 1..672 | 17..688 | 3360 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:02:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-30A-RA | 779 | CG17011-RA | 22..695 | 15..688 | 3370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:02:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9254160..9254833 | 688..15 | 3370 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:02:42 has no hits.
BS21535.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:01 Download gff for
BS21535.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-30A-RA | 29..694 | 22..687 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:27 Download gff for
BS21535.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-30A-RA | 29..694 | 22..687 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:55:02 Download gff for
BS21535.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-30A-RA | 29..694 | 22..687 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:02 Download gff for
BS21535.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9254161..9254826 | 22..687 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:27 Download gff for
BS21535.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9254161..9254826 | 22..687 | 100 | | Minus |
BS21535.pep Sequence
Translation from 16 to 687
> BS21535.pep
MFKYCFICVILAWASRDVLANKTENPLLIDQVAINQQQWFTFIALKESEM
QQKIVRIERSIEERLMAMQSKLAYALNELQTIMGNQSVETLEKLRISHRI
NPALFQRMGTRRFYIEKENKQNWFGASNTCRQLGGHIATIRDEQEFNEIF
SRAPAGVFWIDMNAMFKNGLFASSLTGRSPPFFKWKKEERGNKFDCVNVY
NKEMYNENCFNTHLFICQAEQWD*
BS21535.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-30A-PA | 223 | CG17011-PA | 1..223 | 1..223 | 1186 | 100 | Plus |
| lectin-29Ca-PA | 236 | CG17799-PA | 1..235 | 1..222 | 396 | 35.4 | Plus |
| Acp29AB-PA | 234 | CG17797-PA | 42..233 | 29..222 | 386 | 39.8 | Plus |
| lectin-21Cb-PB | 249 | CG13686-PB | 85..248 | 51..219 | 247 | 31.6 | Plus |
| lectin-22C-PB | 263 | CG42295-PB | 84..260 | 50..223 | 242 | 32.4 | Plus |
