BS21536.complete Sequence
386 bp assembled on 2011-01-18
GenBank Submission: KX804061
> BS21536.complete
GAAGTTATCAGTCGACATGAAATATCCCACAATTATTTTATTTGCGCTAG
CCGCATTCATTTTGCCAACATTTGCCGCAAATGACTACCTGTGGGGTGAA
GTTGGTGCAGATGATTACCAATTGGCAAAGGATACGGTTTCGAAGGCGTT
TTTCGTTGGTCTAGTGCAGACGAAAAAATACGTATTCAAGCAGTCGGACA
ACCTAAATGCGTTGACCATTACGGCAATTAAGATTACCGACAAAAAGAAG
AGTCACGGAGCAACTGCTGTATTGGTCAGTGGAGGTCCTGGATCCAAAGG
AGCAACTATTAAGTTCACTTCCGAACGAGGTTACGGCATCAAGGATATCG
TGGAAATATGGGGTCGTTAAAAGCTTTCTAGACCAT
BS21536.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:02:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34026-RB | 354 | CG34026-PB | 1..354 | 17..370 | 1770 | 100 | Plus |
| CG34026-RA | 354 | CG34026-PA | 1..354 | 17..370 | 1770 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:02:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34026-RB | 747 | CG34026-RB | 27..381 | 17..371 | 1775 | 100 | Plus |
| CG34026-RA | 427 | CG34026-RA | 27..381 | 17..371 | 1775 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:02:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9533844..9534024 | 17..197 | 905 | 100 | Plus |
| X | 23542271 | X | 9534084..9534259 | 196..371 | 880 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:02:47 has no hits.
BS21536.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:02 Download gff for
BS21536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34026-RA | 27..378 | 17..368 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:29 Download gff for
BS21536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34026-RA | 27..378 | 17..368 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:55:04 Download gff for
BS21536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34026-RA | 27..378 | 17..368 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:04 Download gff for
BS21536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9533844..9534023 | 17..196 | 100 | -> | Plus |
| X | 9534085..9534256 | 197..368 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:29 Download gff for
BS21536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9427877..9428056 | 17..196 | 100 | -> | Plus |
| arm_X | 9428118..9428289 | 197..368 | 100 | | Plus |
BS21536.pep Sequence
Translation from 16 to 369
> BS21536.pep
MKYPTIILFALAAFILPTFAANDYLWGEVGADDYQLAKDTVSKAFFVGLV
QTKKYVFKQSDNLNALTITAIKITDKKKSHGATAVLVSGGPGSKGATIKF
TSERGYGIKDIVEIWGR*
BS21536.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34026-PB | 117 | CG34026-PB | 1..117 | 1..117 | 598 | 100 | Plus |
| CG34026-PA | 117 | CG34026-PA | 1..117 | 1..117 | 598 | 100 | Plus |
| CG30413-PA | 122 | CG30413-PA | 28..120 | 22..116 | 192 | 48.4 | Plus |
