BS21537.complete Sequence
317 bp assembled on 2011-01-18
GenBank Submission: KX801728
> BS21537.complete
GAAGTTATCAGTCGACATGACAAATCTACAACGCTGGCTATTTTACGCAT
CGCTCTTTGCGATTCCCTATCTCTCCGTTGTTTTGGGAACAGTGCAAACG
CCACTAACTACCAAGTATTTCCTGCACATTCAGCTTTTACCACTTTTGCT
CCTCGTGATTTTTGGAATATATTCCGTTTGGACTGTTCTATATAGAACTC
TGACTTTTAACGATTGTCCCGAGGCCGCCAAGGAGCTGCAGGATGAAATT
CAGGAGGCTCGCAAGGATTTGATAGCCAAGGGATTTCGGTTTCGAGATTA
GAAGCTTTCTAGACCAT
BS21537.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:18:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33977-RA | 285 | CG33977-PA | 1..285 | 17..301 | 1425 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:18:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33977-RA | 425 | CG33977-RA | 64..348 | 17..301 | 1425 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:18:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 13402839..13402988 | 166..17 | 750 | 100 | Minus |
3R | 32079331 | 3R | 13402636..13402770 | 301..167 | 675 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:18:40 has no hits.
BS21537.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:59 Download gff for
BS21537.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33977-RA | 62..346 | 17..301 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:53:22 Download gff for
BS21537.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33977-RA | 42..326 | 17..301 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:08 Download gff for
BS21537.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33977-RA | 64..348 | 17..301 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:08 Download gff for
BS21537.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13402636..13402770 | 167..301 | 100 | <- | Minus |
3R | 13402839..13402988 | 17..166 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:53:22 Download gff for
BS21537.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9228358..9228492 | 167..301 | 100 | <- | Minus |
arm_3R | 9228561..9228710 | 17..166 | 100 | | Minus |
BS21537.pep Sequence
Translation from 16 to 300
> BS21537.pep
MTNLQRWLFYASLFAIPYLSVVLGTVQTPLTTKYFLHIQLLPLLLLVIFG
IYSVWTVLYRTLTFNDCPEAAKELQDEIQEARKDLIAKGFRFRD*
BS21537.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33977-PA | 94 | CG33977-PA | 1..94 | 1..94 | 485 | 100 | Plus |