BS21542.complete Sequence
419 bp assembled on 2011-01-18
GenBank Submission: KX803152
> BS21542.complete
GAAGTTATCAGTCGACATGGGTAAGGATTACTACAAGATTCTGGGCATCG
AGAGGAATGCGTCCAGCGAAGACGTCAAGAAGGGATACCGCCGGATGGCT
CTCCGCTACCATCCGGACAAGAACGACCATCCGCAGGCCGAGGAGCAGTT
TAGGGAGGTGGTGGCCGCCTTCGAAGTGCTCTTTGATAAGGAAAAGCGCG
AGATATACGACCAGCACGGCGAGGAGGGTCTCAAATGTGATGACGAGCCT
GCTGCGACCTTCGCCCAGCCCACGCCAGACATGCTCCCCTTCATGTGCGC
CGTCGGAGGAACCGTGCTCTTTGCGTTCGCCGCCTACAAGACATTCCAGT
TCTTCAACCGGAAAAAAGAGGCTACCCACGGCGATGGATCCTCCTCGGAC
TGAAAGCTTTCTAGACCAT
BS21542.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:18:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7130-RA | 387 | CG7130-PA | 1..387 | 17..403 | 1935 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:18:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7130-RA | 701 | CG7130-RA | 123..509 | 17..403 | 1935 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:18:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22075248..22075634 | 403..17 | 1935 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:18:53 has no hits.
BS21542.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:01 Download gff for
BS21542.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7130-RA | 123..508 | 17..402 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:53:29 Download gff for
BS21542.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7130-RA | 123..508 | 17..402 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:14 Download gff for
BS21542.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7130-RA | 123..508 | 17..402 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:14 Download gff for
BS21542.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22075249..22075634 | 17..402 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:53:29 Download gff for
BS21542.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22068349..22068734 | 17..402 | 100 | | Minus |
BS21542.pep Sequence
Translation from 16 to 402
> BS21542.pep
MGKDYYKILGIERNASSEDVKKGYRRMALRYHPDKNDHPQAEEQFREVVA
AFEVLFDKEKREIYDQHGEEGLKCDDEPAATFAQPTPDMLPFMCAVGGTV
LFAFAAYKTFQFFNRKKEATHGDGSSSD*
BS21542.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:06:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7130-PA | 128 | CG7130-PA | 1..128 | 1..128 | 684 | 100 | Plus |
| DnaJ-1-PA | 334 | CG10578-PA | 1..80 | 1..88 | 279 | 58 | Plus |
| DnaJ-1-PB | 334 | CG10578-PB | 1..80 | 1..88 | 279 | 58 | Plus |
| CG5001-PC | 346 | CG5001-PC | 1..109 | 1..92 | 266 | 48.6 | Plus |
| CG5001-PD | 350 | CG5001-PD | 1..109 | 1..92 | 266 | 48.6 | Plus |
