BS21545.complete Sequence
842 bp assembled on 2011-01-18
GenBank Submission: KX803865
> BS21545.complete
GAAGTTATCAGTCGACATGTTCCAGCACGCAAACTTTTTTCTGCACGTCT
TCATGGCCTGTGGGCTCTATGGAATCCGTGCAAAGGATGTGTGTCCTCGA
ATGTCAACGGATAAGGAAGTGTGTCTCGTAGAACTGGCGCCAGTACTTAA
GTATATTTCCAACAACCATAAGAGCCACTGGAACTCTGCTAACGAAGTCC
AAGTGAATGAAACCAGGAAACAACTGGCTAAGATTGAAGGTCAGGAGAAG
GAAACAAACGACAAAATAAAAGTAATTCACGACAATGTGGATAACGAATT
TAATGCTCTAAGTGCGAAGATTAAGAATGTGAAAAATATCCAACGTCACT
TAGCAAGTCTGGAGTTACAATTGCAAGAAACGAAAAAAGCCCTAAATCTA
TCCGTGGAAGCGAAAAAAGTGATGCCGAAAACCGAAATCCCATCCCAATT
TCAGAAGATTGGCTGGAGGCATTTTTTCATCGAGAAGAAACACAAAGTGG
ATTGGTTTAAAGCGACAAGCATGTGCCATAAAATGGGTGCTCATCTGTTG
ACAATCCAGAGCGAAGACGAATTGGATGCTATCCGTACGGAACTTAAGGA
CATCAATGACGGAAGTCACGACTTCTGGCTGGACATCAATGACATTGCTA
AGTGGGGCGAATTCATTTCTTTAGCAACGGGAATGAATCCACCCTTTTTG
AAATGGCATAAACATAGGCCTCAGGTGCAAATTCATCAGCGCTGTGTTCA
CTTACGTGGAGGAGAAATGATGGATGGAAAGTGCAGCGAACAGTTTCTTT
TTATTTGCCAGCTTGCAGTAAATTAAAAGCTTTCTAGACCAT
BS21545.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:19:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-21Ca-RA | 810 | CG2826-PA | 1..810 | 17..826 | 4050 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:19:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-21Ca-RA | 940 | CG2826-RA | 28..844 | 17..833 | 4070 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:19:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 624644..625460 | 17..833 | 4070 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:19:09 has no hits.
BS21545.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:03 Download gff for
BS21545.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-21Ca-RA | 33..835 | 22..824 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:53:34 Download gff for
BS21545.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-21Ca-RA | 33..835 | 22..824 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:20 Download gff for
BS21545.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-21Ca-RA | 33..835 | 22..824 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:20 Download gff for
BS21545.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 624649..625451 | 22..824 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:53:34 Download gff for
BS21545.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 624649..625451 | 22..824 | 100 | | Plus |
BS21545.pep Sequence
Translation from 16 to 825
> BS21545.pep
MFQHANFFLHVFMACGLYGIRAKDVCPRMSTDKEVCLVELAPVLKYISNN
HKSHWNSANEVQVNETRKQLAKIEGQEKETNDKIKVIHDNVDNEFNALSA
KIKNVKNIQRHLASLELQLQETKKALNLSVEAKKVMPKTEIPSQFQKIGW
RHFFIEKKHKVDWFKATSMCHKMGAHLLTIQSEDELDAIRTELKDINDGS
HDFWLDINDIAKWGEFISLATGMNPPFLKWHKHRPQVQIHQRCVHLRGGE
MMDGKCSEQFLFICQLAVN*
BS21545.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:06:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-21Ca-PA | 269 | CG2826-PA | 1..269 | 1..269 | 1441 | 100 | Plus |
| CG2839-PA | 826 | CG2839-PA | 1..267 | 1..269 | 392 | 32.7 | Plus |
| lectin-21Cb-PB | 249 | CG13686-PB | 1..247 | 1..265 | 338 | 32 | Plus |
| CG15358-PC | 229 | CG15358-PC | 16..222 | 34..265 | 295 | 36.1 | Plus |
| CG15358-PB | 229 | CG15358-PB | 16..222 | 34..265 | 295 | 36.1 | Plus |
