BS21546.complete Sequence
1160 bp assembled on 2011-01-18
GenBank Submission: KX804304
> BS21546.complete
GAAGTTATCAGTCGACATGGACAAGCCCCAGCTTATTGAGCACCTCCACG
AGGCACTCAACTACACGGTGTACGATACGAAATGGGTGCCCCTTTCGGCC
AAGTTTGTGATTCTGGGCTCCAAGGCCAACGGGCACGGAATCATGGACAT
CTACGAACTCAACCAGGATAAGCTGGTGAAAGTGAAGTCCGTAGAGAAGA
AGGTTGCCTTCAAATGCGGCACCTTCGGAGCAGCTTCGCTCAGGAACCGC
CACATGGCCATCGGAGATTTCGAGGGCAGGCTGCAAGTTCTGGATATGGA
GCAGCCGGACCTTCCGGTCTACAATGTAAAGGCCCACAACGGCATCATCA
ACACCATCGACGCGATTGGCGGCACACAAATCGATTGCGGTGCTCCGGAA
ATCGTTACTGGAAGTCGTGACGGCGCCGTTAAAGTCTGGGATATCCGCCA
GGGGCAGGCTCCTGTGGTGGACATGTCGCCGCCGCCGCAAATGGGCGATG
GCGTTAACAACAGCAGTGGCCGCCGGGACTGCTGGGCCGTGGCCTTTGGA
AATACCTACAACGCTGAGGAGCGCATCGTTGCCGCCGGCTATGATAATGG
AGATCTAAAGATATTCGATTTGCGATCCCTTTCCGTACGCTGGGAGGCCA
CCATGAAGAATGGTATCTGTGGACTGGAGTTCGATCGCCGGGACATTCCC
ATGAACAAGCTAGCGGTCACCACTTTGGAGGGCGGTCTCCTTGTCTTCGA
TATGAGAACCCAACATCCGACCAAGGGATTTAGTTACGTGGAGGAACGCA
ACGCCGGACGCAGCGTGGGAACAAATGGCGTGATCAGCGGACCCAAAGCC
ACCGTTTGGGTAGTTCGTCATCTGCCCCAGAATCGGGATCTCTTTCTCAC
GGGCGGCGGAACTGGTTCCATTCGCCTGTGGCAGTACGAGTATCCCGACA
GGAGGGTCATTGATGACTCTGATGGAAACAAGTTGGGAGTTGCTGGAGCC
CTTAATATGCTTAGTGCAGCCACTTTGAGCTCTCAGCCGGTTCACTGCTT
TGACTGGCATCCAGACAAACTGGGCCTAGCCGTCTGTGGAGCATTCGATC
AAAGCGTGCGCGTTTTAATTACCACCAAACTAAACACTTTTTAGAAGCTT
TCTAGACCAT
BS21546.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:18:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14353-RA | 1128 | CG14353-PA | 1..1128 | 17..1144 | 5640 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:18:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14353-RA | 1485 | CG14353-RA | 112..1240 | 17..1145 | 5645 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:18:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 17908585..17909438 | 292..1145 | 4270 | 100 | Plus |
3L | 28110227 | 3L | 17908254..17908529 | 17..292 | 1380 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:18:25 has no hits.
BS21546.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:58 Download gff for
BS21546.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14353-RA | 112..1239 | 17..1144 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:53:14 Download gff for
BS21546.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14353-RA | 112..1239 | 17..1144 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:02 Download gff for
BS21546.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14353-RA | 112..1239 | 17..1144 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:02 Download gff for
BS21546.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 17908254..17908528 | 17..291 | 100 | -> | Plus |
3L | 17908585..17909437 | 292..1144 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:53:14 Download gff for
BS21546.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 17901354..17901628 | 17..291 | 100 | -> | Plus |
arm_3L | 17901685..17902537 | 292..1144 | 100 | | Plus |
BS21546.pep Sequence
Translation from 16 to 1143
> BS21546.pep
MDKPQLIEHLHEALNYTVYDTKWVPLSAKFVILGSKANGHGIMDIYELNQ
DKLVKVKSVEKKVAFKCGTFGAASLRNRHMAIGDFEGRLQVLDMEQPDLP
VYNVKAHNGIINTIDAIGGTQIDCGAPEIVTGSRDGAVKVWDIRQGQAPV
VDMSPPPQMGDGVNNSSGRRDCWAVAFGNTYNAEERIVAAGYDNGDLKIF
DLRSLSVRWEATMKNGICGLEFDRRDIPMNKLAVTTLEGGLLVFDMRTQH
PTKGFSYVEERNAGRSVGTNGVISGPKATVWVVRHLPQNRDLFLTGGGTG
SIRLWQYEYPDRRVIDDSDGNKLGVAGALNMLSAATLSSQPVHCFDWHPD
KLGLAVCGAFDQSVRVLITTKLNTF*
BS21546.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14353-PA | 375 | CG14353-PA | 1..375 | 1..375 | 1987 | 100 | Plus |