Clone BS21546 Report

Search the DGRC for BS21546

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:215
Well:46
Vector:pDNR-Dual
Associated Gene/TranscriptCG14353-RA
Protein status:BS21546.pep: full length peptide match
Sequenced Size:1160

Clone Sequence Records

BS21546.complete Sequence

1160 bp assembled on 2011-01-18

GenBank Submission: KX804304

> BS21546.complete
GAAGTTATCAGTCGACATGGACAAGCCCCAGCTTATTGAGCACCTCCACG
AGGCACTCAACTACACGGTGTACGATACGAAATGGGTGCCCCTTTCGGCC
AAGTTTGTGATTCTGGGCTCCAAGGCCAACGGGCACGGAATCATGGACAT
CTACGAACTCAACCAGGATAAGCTGGTGAAAGTGAAGTCCGTAGAGAAGA
AGGTTGCCTTCAAATGCGGCACCTTCGGAGCAGCTTCGCTCAGGAACCGC
CACATGGCCATCGGAGATTTCGAGGGCAGGCTGCAAGTTCTGGATATGGA
GCAGCCGGACCTTCCGGTCTACAATGTAAAGGCCCACAACGGCATCATCA
ACACCATCGACGCGATTGGCGGCACACAAATCGATTGCGGTGCTCCGGAA
ATCGTTACTGGAAGTCGTGACGGCGCCGTTAAAGTCTGGGATATCCGCCA
GGGGCAGGCTCCTGTGGTGGACATGTCGCCGCCGCCGCAAATGGGCGATG
GCGTTAACAACAGCAGTGGCCGCCGGGACTGCTGGGCCGTGGCCTTTGGA
AATACCTACAACGCTGAGGAGCGCATCGTTGCCGCCGGCTATGATAATGG
AGATCTAAAGATATTCGATTTGCGATCCCTTTCCGTACGCTGGGAGGCCA
CCATGAAGAATGGTATCTGTGGACTGGAGTTCGATCGCCGGGACATTCCC
ATGAACAAGCTAGCGGTCACCACTTTGGAGGGCGGTCTCCTTGTCTTCGA
TATGAGAACCCAACATCCGACCAAGGGATTTAGTTACGTGGAGGAACGCA
ACGCCGGACGCAGCGTGGGAACAAATGGCGTGATCAGCGGACCCAAAGCC
ACCGTTTGGGTAGTTCGTCATCTGCCCCAGAATCGGGATCTCTTTCTCAC
GGGCGGCGGAACTGGTTCCATTCGCCTGTGGCAGTACGAGTATCCCGACA
GGAGGGTCATTGATGACTCTGATGGAAACAAGTTGGGAGTTGCTGGAGCC
CTTAATATGCTTAGTGCAGCCACTTTGAGCTCTCAGCCGGTTCACTGCTT
TGACTGGCATCCAGACAAACTGGGCCTAGCCGTCTGTGGAGCATTCGATC
AAAGCGTGCGCGTTTTAATTACCACCAAACTAAACACTTTTTAGAAGCTT
TCTAGACCAT

BS21546.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:18:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG14353-RA 1128 CG14353-PA 1..1128 17..1144 5640 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:18:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG14353-RA 1485 CG14353-RA 112..1240 17..1145 5645 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:18:24
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17908585..17909438 292..1145 4270 100 Plus
3L 28110227 3L 17908254..17908529 17..292 1380 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:18:25 has no hits.

BS21546.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:58 Download gff for BS21546.complete
Subject Subject Range Query Range Percent Splice Strand
CG14353-RA 112..1239 17..1144 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:53:14 Download gff for BS21546.complete
Subject Subject Range Query Range Percent Splice Strand
CG14353-RA 112..1239 17..1144 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:02 Download gff for BS21546.complete
Subject Subject Range Query Range Percent Splice Strand
CG14353-RA 112..1239 17..1144 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:02 Download gff for BS21546.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17908254..17908528 17..291 100 -> Plus
3L 17908585..17909437 292..1144 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:53:14 Download gff for BS21546.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17901354..17901628 17..291 100 -> Plus
arm_3L 17901685..17902537 292..1144 100   Plus

BS21546.pep Sequence

Translation from 16 to 1143

> BS21546.pep
MDKPQLIEHLHEALNYTVYDTKWVPLSAKFVILGSKANGHGIMDIYELNQ
DKLVKVKSVEKKVAFKCGTFGAASLRNRHMAIGDFEGRLQVLDMEQPDLP
VYNVKAHNGIINTIDAIGGTQIDCGAPEIVTGSRDGAVKVWDIRQGQAPV
VDMSPPPQMGDGVNNSSGRRDCWAVAFGNTYNAEERIVAAGYDNGDLKIF
DLRSLSVRWEATMKNGICGLEFDRRDIPMNKLAVTTLEGGLLVFDMRTQH
PTKGFSYVEERNAGRSVGTNGVISGPKATVWVVRHLPQNRDLFLTGGGTG
SIRLWQYEYPDRRVIDDSDGNKLGVAGALNMLSAATLSSQPVHCFDWHPD
KLGLAVCGAFDQSVRVLITTKLNTF*

BS21546.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG14353-PA 375 CG14353-PA 1..375 1..375 1987 100 Plus