BS21548.complete Sequence
452 bp assembled on 2011-01-18
GenBank Submission: KX805182
> BS21548.complete
GAAGTTATCAGTCGACATGGCGGACGACAACTGCATTTTCTGCCTAATTT
CCGATGGGCGGATCCCCTCCACTGTTTTGGAAGTCGAAAACGATGACTTT
GTCATCTTCCAGGACATTAAACCCGCTTCCCAGCACCATTACTTAGCAGT
GACAAAAAAGCACTACGCTAGCCTCAAGGATCTTAACAAATCGCACGATT
CTTTGGTGCAGCTCATGGAGAACGCCCTGAAGGATCTTCTGGTGTCCAAG
GGAGTTTCTGTCGATGATGCCCTCTTCGGATTCCATCTGCCGCCGTTTAT
CACGGTGAAGCATCTTCACATGCATGCCATTAGCCCACGCACCCAAATGA
CCTTCCTATCTAAGATGATCTTTAGACCCTCCGTTTGGTTCAAAACCGTC
GACGAGGCGCGTATTTACCTTTCCCAAAAAGAATAGAAGCTTTCTAGACC
AT
BS21548.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:18:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34015-RA | 420 | CG34015-PA | 1..420 | 17..436 | 2100 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:18:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34015-RA | 594 | CG34015-RA | 82..503 | 16..437 | 2110 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:18:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16447770..16447963 | 399..206 | 970 | 100 | Minus |
| X | 23542271 | X | 16448031..16448221 | 206..16 | 955 | 100 | Minus |
| X | 23542271 | X | 16447659..16447698 | 437..398 | 200 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:18:34 has no hits.
BS21548.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:39:59 Download gff for
BS21548.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34015-RA | 83..491 | 17..425 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:53:20 Download gff for
BS21548.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34015-RA | 83..491 | 17..425 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:05 Download gff for
BS21548.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34015-RA | 83..491 | 17..425 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:05 Download gff for
BS21548.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16447671..16447698 | 398..425 | 100 | <- | Minus |
| X | 16447772..16447962 | 207..397 | 100 | <- | Minus |
| X | 16448031..16448220 | 17..206 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:53:20 Download gff for
BS21548.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16342064..16342253 | 17..206 | 100 | | Minus |
| arm_X | 16341704..16341731 | 398..425 | 100 | <- | Minus |
| arm_X | 16341805..16341995 | 207..397 | 100 | <- | Minus |
BS21548.pep Sequence
Translation from 16 to 435
> BS21548.pep
MADDNCIFCLISDGRIPSTVLEVENDDFVIFQDIKPASQHHYLAVTKKHY
ASLKDLNKSHDSLVQLMENALKDLLVSKGVSVDDALFGFHLPPFITVKHL
HMHAISPRTQMTFLSKMIFRPSVWFKTVDEARIYLSQKE*
BS21548.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:05:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34015-PA | 139 | CG34015-PA | 1..139 | 1..139 | 724 | 100 | Plus |
| CG15362-PA | 168 | CG15362-PA | 31..167 | 4..139 | 330 | 47.4 | Plus |
