BS21551.complete Sequence
818 bp assembled on 2011-01-18
GenBank Submission: KX802298
> BS21551.complete
GAAGTTATCAGTCGACATGTCTAACCAGCGATCCCGACACGTTCGTCGTC
CGGCAGCGGAAATAGTCCGCGAACTGAGGAATCTTCGCGCCTCGCCTCTG
CGGATCGACGACGAGAACGAGTCGTGGGTGAATGGCTACGAGAAGCCACC
AACTCCGGATCTACCGGTGACCAGTCGCGATCAGTTGGAGCTGCTACGTC
TGAGCCGCCATCGAATCGGTCTGCTTCTGGTTCGACCCGCCTTCGAGCAG
GCCGTCACTGGATGCTTTGTCCGCGTGAATGTCAGTGGGCAGGGAGAGTT
GCCTGATCATCGAATCGCCGAGGTGCTGGGCATCTGCGAACTGGACTTTG
GCTACAAAGTGGAGCAGATACCCACGAATGTGGCGCTGCGATTGCGCTAC
GATGACCTGGAGATGCAGCACGAGATTAACGATGTCTCTAACCTGAACTT
CACCCAGGAGGAATTCGAACTGTGGCGCGATAACTGTGTTAACCAGGCCA
TAAGTCCACCCACCACCCACATACTGACGCGCAAGAAGGTCGAACTGTAC
AACGCACTGCAGTTGGAGGCCAAGCCTTTAAGCCTGATCCAAAGGACCTT
CTCCTTCGCCCTGAGGCCCCAGCAGAAAATCGGCATCATGGAGCGGCATG
GCGTTGTTTATCCCTGGCAATTGAATCATTCGCTCCCGTTCGTTTCGCAA
TCGCCAACTGAAAATCCATCGAGGGGAAAAGCGGATACCGTAGACGAGGA
GGAAGATCCGGGGGCAGCTGCTCCATTATTACCAAAAACTGAACCAAATT
AAAAGCTTTCTAGACCAT
BS21551.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:19:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12498-RA | 786 | CG12498-PA | 1..786 | 17..802 | 3930 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:19:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12498-RA | 966 | CG12498-RA | 87..872 | 17..802 | 3930 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:19:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2809967..2810752 | 17..802 | 3930 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 16:19:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Transpac | 5249 | Transpac 5249bp Derived from AF222049 (AF222049.1) (Rel. 62, Last updated, Version 1). | 2811..2841 | 785..815 | 110 | 83.9 | Plus |
BS21551.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:06 Download gff for
BS21551.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12498-RA | 87..870 | 17..800 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:53:45 Download gff for
BS21551.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12498-RA | 87..870 | 17..800 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:32 Download gff for
BS21551.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12498-RA | 87..870 | 17..800 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:32 Download gff for
BS21551.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2809967..2810750 | 17..800 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:53:45 Download gff for
BS21551.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2704000..2704783 | 17..800 | 100 | | Plus |
BS21551.pep Sequence
Translation from 16 to 801
> BS21551.pep
MSNQRSRHVRRPAAEIVRELRNLRASPLRIDDENESWVNGYEKPPTPDLP
VTSRDQLELLRLSRHRIGLLLVRPAFEQAVTGCFVRVNVSGQGELPDHRI
AEVLGICELDFGYKVEQIPTNVALRLRYDDLEMQHEINDVSNLNFTQEEF
ELWRDNCVNQAISPPTTHILTRKKVELYNALQLEAKPLSLIQRTFSFALR
PQQKIGIMERHGVVYPWQLNHSLPFVSQSPTENPSRGKADTVDEEEDPGA
AAPLLPKTEPN*
BS21551.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:06:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12498-PA | 261 | CG12498-PA | 1..261 | 1..261 | 1364 | 100 | Plus |
| Rtf1-PB | 775 | CG10955-PB | 419..563 | 42..186 | 237 | 33.1 | Plus |
| Rtf1-PA | 775 | CG10955-PA | 419..563 | 42..186 | 237 | 33.1 | Plus |
| CG31702-PA | 441 | CG31702-PA | 99..223 | 51..180 | 156 | 33.8 | Plus |
| CG31703-PA | 439 | CG31703-PA | 99..223 | 51..180 | 153 | 33.8 | Plus |
