BS21556.complete Sequence
653 bp assembled on 2011-01-18
GenBank Submission: KX806000
> BS21556.complete
GAAGTTATCAGTCGACATGATGTTTAGCTGGACTCGACTGGCCAATCCGC
TAAAGATGAGCTGCCAGTTAGTAACGCATTTCTCGACAGCCCCCCCTCCG
AATGCAAAATTCTGGACGAAGCTGTTCGGAAAGTACCTGTTGCTGACGAA
TACCATCGGATCGGGACTGCTCCTCGCCATCGGCGATGCAATTGCTCAGC
AGTACGAGAGGTTTGGTGAAAAGAAAGCCTTTGACTACTCTCGCTCAGGA
TGCATGATGATTACGGGCTCGGTGATTGGTCCGATTCAGCACGGCTTCTA
TCTGCTGTTGGATGGGGTTCTACCGGGCACTAGTGGATGGGGTGTGCTGC
ATAAGATACTCGTGGATCAGTTAATCATGTCACCCATCTATATATTCCTG
TTTTTTTACGTCAGCAGCTTGCTGGGCGGAAAGAGTTTCGTGGAGTGCAA
TAGCGAGCTGTCCGAGAAGTTCCTCTACACATGGATGTTGGACTGCTGCT
TTTGGCCGGGTCTGCAATATCTTAACTTCCGCTTCCTCAATTCCCTCTAT
CGCGTGGTGTTCGTCAATGTAGCCAATTGCGTGTACGTCGTTCTGCTTTC
TCATATAAAGTACGGGGTTTCCAACCACGATCCCTAGAAGCTTTCTAGAC
CAT
BS21556.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:19:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32263-RA | 621 | CG32263-PA | 1..621 | 17..637 | 3105 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:19:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32263-RA | 803 | CG32263-RA | 145..765 | 17..637 | 3105 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:19:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3810350..3810970 | 637..17 | 3105 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:19:53 has no hits.
BS21556.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:08 Download gff for
BS21556.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32263-RA | 145..765 | 17..637 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:53:51 Download gff for
BS21556.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32263-RA | 145..765 | 17..637 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:37 Download gff for
BS21556.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32263-RA | 145..765 | 17..637 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:37 Download gff for
BS21556.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3810350..3810970 | 17..637 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:53:51 Download gff for
BS21556.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3810350..3810970 | 17..637 | 100 | | Minus |
BS21556.pep Sequence
Translation from 16 to 636
> BS21556.pep
MMFSWTRLANPLKMSCQLVTHFSTAPPPNAKFWTKLFGKYLLLTNTIGSG
LLLAIGDAIAQQYERFGEKKAFDYSRSGCMMITGSVIGPIQHGFYLLLDG
VLPGTSGWGVLHKILVDQLIMSPIYIFLFFYVSSLLGGKSFVECNSELSE
KFLYTWMLDCCFWPGLQYLNFRFLNSLYRVVFVNVANCVYVVLLSHIKYG
VSNHDP*
BS21556.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:06:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32263-PA | 206 | CG32263-PA | 1..206 | 1..206 | 1107 | 100 | Plus |
| CG32262-PA | 273 | CG32262-PA | 69..245 | 33..206 | 400 | 46.3 | Plus |
| CG1662-PB | 245 | CG1662-PB | 73..238 | 39..203 | 244 | 36.1 | Plus |
| CG1662-PA | 245 | CG1662-PA | 73..238 | 39..203 | 244 | 36.1 | Plus |
| CG5906-PA | 196 | CG5906-PA | 25..186 | 39..199 | 236 | 35.8 | Plus |
