BS21562.complete Sequence
485 bp assembled on 2011-01-18
GenBank Submission: KX804117
> BS21562.complete
GAAGTTATCAGTCGACATGATGGTCAAACTTCTCCTGCTGTTCCTGGTAT
GCTGGAGTGCTCTTCCTTTGGAGTCATCTCCCTTGGGTAACCGATATAAC
CTAGAGATCGGTGAAAAGCAGTACTACATTTCGTTGGCAAAGACCAACTG
GTTCGAGGCAAGCAACCACTGTCGTCAGAATGGCGGATTTCTTCTCAATT
TGGAGAGCAGAGAGGAACTGGAGCTCCTTAGCCCCCACCTTCACCCAGCC
TACAGCTATTGGCTATCCATCAATGACCTCGGCGAACGGGGCGTATACGT
GTCGGAGGCCACTGGTCTAGAGGCTCCGTTTCTTAACTGGTCCGCCGGAG
AGCCGGACAACAGCAGTGGCTACGATCGATGTGTCGAGCTGTGGTTGTCG
ACAACCTCCTTCCAGATGAACGACCTCCCATGCTATAGCTCCGTCGCCTT
CATTTGCCAGCTTAACTAGAAGCTTTCTAGACCAT
BS21562.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:20:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lectin-37Db-RB | 453 | CG33533-PB | 1..453 | 17..469 | 2265 | 100 | Plus |
lectin-37Db-RA | 453 | CG33533-PA | 1..453 | 17..469 | 2265 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:20:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lectin-37Db-RB | 548 | CG33533-RB | 23..475 | 17..469 | 2265 | 100 | Plus |
lectin-37Db-RA | 562 | CG33533-RA | 23..475 | 17..469 | 2265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:20:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19419307..19419680 | 96..469 | 1870 | 100 | Plus |
2L | 23513712 | 2L | 19419097..19419179 | 17..99 | 400 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:20:12 has no hits.
BS21562.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:11 Download gff for
BS21562.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-37Db-RA | 23..475 | 17..469 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:53:59 Download gff for
BS21562.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-37Db-RA | 23..475 | 17..469 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:45 Download gff for
BS21562.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-37Db-RA | 23..475 | 17..469 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:45 Download gff for
BS21562.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19419097..19419175 | 17..95 | 100 | -> | Plus |
2L | 19419307..19419680 | 96..469 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:53:59 Download gff for
BS21562.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19419097..19419175 | 17..95 | 100 | -> | Plus |
arm_2L | 19419307..19419680 | 96..469 | 100 | | Plus |
BS21562.pep Sequence
Translation from 16 to 468
> BS21562.pep
MMVKLLLLFLVCWSALPLESSPLGNRYNLEIGEKQYYISLAKTNWFEASN
HCRQNGGFLLNLESREELELLSPHLHPAYSYWLSINDLGERGVYVSEATG
LEAPFLNWSAGEPDNSSGYDRCVELWLSTTSFQMNDLPCYSSVAFICQLN
*
BS21562.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:06:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lectin-37Db-PB | 150 | CG33533-PB | 1..150 | 1..150 | 809 | 100 | Plus |
lectin-37Db-PA | 150 | CG33533-PA | 1..150 | 1..150 | 809 | 100 | Plus |
lectin-24Db-PA | 359 | CG2958-PA | 241..354 | 31..148 | 227 | 42 | Plus |
CG9134-PC | 188 | CG9134-PC | 55..185 | 29..149 | 218 | 35.1 | Plus |
CG9134-PA | 188 | CG9134-PA | 55..185 | 29..149 | 218 | 35.1 | Plus |