Clone BS21562 Report

Search the DGRC for BS21562

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:215
Well:62
Vector:pDNR-Dual
Associated Gene/Transcriptlectin-37Db-RA
Protein status:BS21562.pep: gold
Sequenced Size:485

Clone Sequence Records

BS21562.complete Sequence

485 bp assembled on 2011-01-18

GenBank Submission: KX804117

> BS21562.complete
GAAGTTATCAGTCGACATGATGGTCAAACTTCTCCTGCTGTTCCTGGTAT
GCTGGAGTGCTCTTCCTTTGGAGTCATCTCCCTTGGGTAACCGATATAAC
CTAGAGATCGGTGAAAAGCAGTACTACATTTCGTTGGCAAAGACCAACTG
GTTCGAGGCAAGCAACCACTGTCGTCAGAATGGCGGATTTCTTCTCAATT
TGGAGAGCAGAGAGGAACTGGAGCTCCTTAGCCCCCACCTTCACCCAGCC
TACAGCTATTGGCTATCCATCAATGACCTCGGCGAACGGGGCGTATACGT
GTCGGAGGCCACTGGTCTAGAGGCTCCGTTTCTTAACTGGTCCGCCGGAG
AGCCGGACAACAGCAGTGGCTACGATCGATGTGTCGAGCTGTGGTTGTCG
ACAACCTCCTTCCAGATGAACGACCTCCCATGCTATAGCTCCGTCGCCTT
CATTTGCCAGCTTAACTAGAAGCTTTCTAGACCAT

BS21562.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:20:13
Subject Length Description Subject Range Query Range Score Percent Strand
lectin-37Db-RB 453 CG33533-PB 1..453 17..469 2265 100 Plus
lectin-37Db-RA 453 CG33533-PA 1..453 17..469 2265 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:20:14
Subject Length Description Subject Range Query Range Score Percent Strand
lectin-37Db-RB 548 CG33533-RB 23..475 17..469 2265 100 Plus
lectin-37Db-RA 562 CG33533-RA 23..475 17..469 2265 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:20:11
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19419307..19419680 96..469 1870 100 Plus
2L 23513712 2L 19419097..19419179 17..99 400 98.8 Plus
Blast to na_te.dros performed on 2014-11-26 16:20:12 has no hits.

BS21562.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:11 Download gff for BS21562.complete
Subject Subject Range Query Range Percent Splice Strand
lectin-37Db-RA 23..475 17..469 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:53:59 Download gff for BS21562.complete
Subject Subject Range Query Range Percent Splice Strand
lectin-37Db-RA 23..475 17..469 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:45 Download gff for BS21562.complete
Subject Subject Range Query Range Percent Splice Strand
lectin-37Db-RA 23..475 17..469 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:45 Download gff for BS21562.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19419097..19419175 17..95 100 -> Plus
2L 19419307..19419680 96..469 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:53:59 Download gff for BS21562.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19419097..19419175 17..95 100 -> Plus
arm_2L 19419307..19419680 96..469 100   Plus

BS21562.pep Sequence

Translation from 16 to 468

> BS21562.pep
MMVKLLLLFLVCWSALPLESSPLGNRYNLEIGEKQYYISLAKTNWFEASN
HCRQNGGFLLNLESREELELLSPHLHPAYSYWLSINDLGERGVYVSEATG
LEAPFLNWSAGEPDNSSGYDRCVELWLSTTSFQMNDLPCYSSVAFICQLN
*

BS21562.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:06:27
Subject Length Description Subject Range Query Range Score Percent Strand
lectin-37Db-PB 150 CG33533-PB 1..150 1..150 809 100 Plus
lectin-37Db-PA 150 CG33533-PA 1..150 1..150 809 100 Plus
lectin-24Db-PA 359 CG2958-PA 241..354 31..148 227 42 Plus
CG9134-PC 188 CG9134-PC 55..185 29..149 218 35.1 Plus
CG9134-PA 188 CG9134-PA 55..185 29..149 218 35.1 Plus