Clone BS21563 Report

Search the DGRC for BS21563

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:215
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptCG15432-RA
Protein status:BS21563.pep: full length peptide match
Sequenced Size:389

Clone Sequence Records

BS21563.complete Sequence

389 bp assembled on 2011-01-18

GenBank Submission: KX805073

> BS21563.complete
GAAGTTATCAGTCGACATGTCCGACGAGTACGCCTGCGTGGCCAAGGGCA
AGCTTAAACTAAAGAACGATTCGGATCTCAAGAAGAAAAAGAAGAAGCAC
AAGGGCAAGGACAAGGAGAAGGAGCTGCAGAAGGCGTTCGTGGAGCAGCA
AATAGCGGAATCGGGGGCCACATCCTCCTCCGCCACCAGTGGCTACGAGC
GGAAGCTCACCAAGGCCGAGCTGGCCAGTAAGAAGCAGCAGGAAAAGATG
CGCAACAAGCGAATCATGGACAAGGCACAAACCACCCACAAGGAGCGCGT
GGAGAAATTCAACGAGCACCTGGACACGCTCACCGAGCACTTTGACATCC
CCAAGGTGTCCTGGACGAAGTGAAAGCTTTCTAGACCAT

BS21563.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:20:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG15432-RC 357 CG15432-PC 1..357 17..373 1785 100 Plus
CG15432-RB 357 CG15432-PB 1..357 17..373 1785 100 Plus
CG15432-RA 357 CG15432-PA 1..357 17..373 1785 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:20:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG15432-RC 557 CG15432-RC 67..426 14..373 1800 100 Plus
CG15432-RB 536 CG15432-RB 46..405 14..373 1800 100 Plus
CG15432-RA 557 CG15432-RA 67..426 14..373 1800 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:20:15
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4442495..4442854 14..373 1800 100 Plus
Blast to na_te.dros performed 2014-11-26 16:20:16
Subject Length Description Subject Range Query Range Score Percent Strand
HMS-Beagle 7062 HMS-Beagle Beagle 7062bp 638..699 86..147 121 66.1 Plus

BS21563.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:11 Download gff for BS21563.complete
Subject Subject Range Query Range Percent Splice Strand
CG15432-RA 70..425 17..372 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:54:00 Download gff for BS21563.complete
Subject Subject Range Query Range Percent Splice Strand
CG15432-RA 70..425 17..372 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:46 Download gff for BS21563.complete
Subject Subject Range Query Range Percent Splice Strand
CG15432-RA 70..425 17..372 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:46 Download gff for BS21563.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4442498..4442853 17..372 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:54:00 Download gff for BS21563.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4442498..4442853 17..372 100   Plus

BS21563.pep Sequence

Translation from 16 to 372

> BS21563.pep
MSDEYACVAKGKLKLKNDSDLKKKKKKHKGKDKEKELQKAFVEQQIAESG
ATSSSATSGYERKLTKAELASKKQQEKMRNKRIMDKAQTTHKERVEKFNE
HLDTLTEHFDIPKVSWTK*

BS21563.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:06:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG15432-PC 118 CG15432-PC 1..118 1..118 602 100 Plus
CG15432-PB 118 CG15432-PB 1..118 1..118 602 100 Plus
CG15432-PA 118 CG15432-PA 1..118 1..118 602 100 Plus