BS21567.complete Sequence
509 bp assembled on 2011-01-18
GenBank Submission: KX803108
> BS21567.complete
GAAGTTATCAGTCGACATGTCGCATGGGAATAAGCAAAATTTCACCAAGA
TCTGGGATCTTGGAAAGTGGGAATCGCGGGATATAAAGCATTACAGCACA
ATATCGCGAATCCAAAAACAACTACGTCTCGGAAACTGGGAATATCTCTG
TCAGCATCCAGAGATACGGGCCATAATTCGTGTTATCCTTCATCAGGCAC
TCAATGGAAAACCGAAGCCGGAAAATCTCCGAAAATTTGTTGCTGATTTG
TTCAACTGCGCACAGAATCCGCTGCTAGTGCCTATGATTAACACACAGCT
GAAGTACGTTAAGAACGAATTGAAACGTGGCCGCTGGAGTCAGTTCGACG
CCGAGATGCTCTTCATGGAGAGTCCATCGACGCACTCACTCCTCTCGACG
GCATCCGAGGATAGCAATGTCCATCCGGTGCTTACATATGCGCTGGTCTT
CAAGAAACCCGATGAGTGCGGCATCGACAAGCCGCCGTTCTAGAAGCTTT
CTAGACCAT
BS21567.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:20:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34012-RA | 477 | CG34012-PA | 1..477 | 17..493 | 2385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:20:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34012-RA | 551 | CG34012-RA | 31..507 | 17..493 | 2385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:20:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11108864..11109071 | 493..286 | 1040 | 100 | Minus |
| 3L | 28110227 | 3L | 11109329..11109475 | 163..17 | 735 | 100 | Minus |
| 3L | 28110227 | 3L | 11109144..11109268 | 286..162 | 625 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:20:30 has no hits.
BS21567.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:13 Download gff for
BS21567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34012-RA | 31..507 | 17..493 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:54:07 Download gff for
BS21567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34012-RA | 31..507 | 17..493 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:53 Download gff for
BS21567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34012-RA | 31..507 | 17..493 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:53 Download gff for
BS21567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11109329..11109475 | 17..163 | 100 | | Minus |
| 3L | 11108864..11109070 | 287..493 | 100 | <- | Minus |
| 3L | 11109144..11109266 | 164..286 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:54:07 Download gff for
BS21567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11101964..11102170 | 287..493 | 100 | <- | Minus |
| arm_3L | 11102244..11102366 | 164..286 | 100 | <- | Minus |
| arm_3L | 11102429..11102575 | 17..163 | 100 | | Minus |
BS21567.pep Sequence
Translation from 16 to 492
> BS21567.pep
MSHGNKQNFTKIWDLGKWESRDIKHYSTISRIQKQLRLGNWEYLCQHPEI
RAIIRVILHQALNGKPKPENLRKFVADLFNCAQNPLLVPMINTQLKYVKN
ELKRGRWSQFDAEMLFMESPSTHSLLSTASEDSNVHPVLTYALVFKKPDE
CGIDKPPF*
BS21567.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:06:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34012-PA | 158 | CG34012-PA | 1..158 | 1..158 | 850 | 100 | Plus |
| CG34021-PA | 161 | CG34021-PA | 30..128 | 24..124 | 199 | 42.6 | Plus |
