Clone BS21568 Report

Search the DGRC for BS21568

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:215
Well:68
Vector:pDNR-Dual
Associated Gene/TranscriptAcyp-RA
Protein status:BS21568.pep: gold
Sequenced Size:395

Clone Sequence Records

BS21568.complete Sequence

395 bp assembled on 2011-01-18

GenBank Submission: KX806276

> BS21568.complete
GAAGTTATCAGTCGACATGGCGACCCATAATGTCCATTCCTGCGAATTCG
AGGTATTTGGCCGCGTGCAGGGCGTCAACTTCCGGCGACACGCCCTGCGA
AAGGCCAAGACACTGGGTCTTCGCGGCTGGTGCATGAACTCCAGCAGGGG
CACCGTGAAGGGTTACATCGAAGGTCGTCCGGCCGAGATGGATGTGATGA
AGGAGTGGCTCAGGACGACGGGCAGTCCGCTGTCCAGCATCGAGAAGGTG
GAGTTCAGTTCTCAGCGTGAGCGCGATCGCTATGGCTATGCCAACTTTCA
TATCAAGCCCGATCCGCACGAGAATCGCCCAGTTCATGAAGGATTGGGCA
GTAGTTCCAGCCACCATGATAGCAATTAGAAGCTTTCTAGACCAT

BS21568.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:20:36
Subject Length Description Subject Range Query Range Score Percent Strand
Acyp-RB 363 CG16870-PB 1..363 17..379 1815 100 Plus
Acyp-RA 363 CG16870-PA 1..363 17..379 1815 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:20:37
Subject Length Description Subject Range Query Range Score Percent Strand
Acyp-RB 570 CG16870-RB 119..481 17..379 1815 100 Plus
Acyp-RA 514 CG16870-RA 119..481 17..379 1815 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:20:33
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13912201..13912563 17..379 1815 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:20:35 has no hits.

BS21568.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:14 Download gff for BS21568.complete
Subject Subject Range Query Range Percent Splice Strand
Acyp-RA 63..425 17..379 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:54:09 Download gff for BS21568.complete
Subject Subject Range Query Range Percent Splice Strand
Acyp-RA 119..481 17..379 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:54 Download gff for BS21568.complete
Subject Subject Range Query Range Percent Splice Strand
Acyp-RA 119..481 17..379 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:54 Download gff for BS21568.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13912201..13912563 17..379 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:54:09 Download gff for BS21568.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13912201..13912563 17..379 100   Plus

BS21568.pep Sequence

Translation from 16 to 378

> BS21568.pep
MATHNVHSCEFEVFGRVQGVNFRRHALRKAKTLGLRGWCMNSSRGTVKGY
IEGRPAEMDVMKEWLRTTGSPLSSIEKVEFSSQRERDRYGYANFHIKPDP
HENRPVHEGLGSSSSHHDSN*

BS21568.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:06:34
Subject Length Description Subject Range Query Range Score Percent Strand
Acyp-PB 120 CG16870-PB 1..120 1..120 651 100 Plus
Acyp-PA 120 CG16870-PA 1..120 1..120 651 100 Plus
CG11052-PD 149 CG11052-PD 56..149 6..99 240 48.9 Plus
CG11052-PC 149 CG11052-PC 56..149 6..99 240 48.9 Plus
CG11052-PB 149 CG11052-PB 56..149 6..99 240 48.9 Plus