BS21569.complete Sequence
401 bp assembled on 2011-01-18
GenBank Submission: KX801164
> BS21569.complete
GAAGTTATCAGTCGACATGCACTTGACATCCACGCTGATTGGACTCCTTA
TCTGCGGTCTGGGGATCGAGCTGCCCACGCGCACTGCCGCACAATTCTGG
TCGGTGGATCCTGTTACGCAGTGGCGAAAAGAGGCTCTGGCCGAGAGGGG
ATCCGGCATCTGTTACAGGACGCTCACCGTGGAAACCATCAATCCCAACT
CCAGAAATCGTCAGTTCTCCTACTGCTGCGATGGTTATGTGAATAAGGGA
ACAAGCCAGAACCTGAAGTGCGAGCCCATTTGCTCGGAGGACTGCTCCAA
TGGATTGTGCCTGGCGCCCGAGGAGTGCGAGTGTGCTCCGGGTTACTATC
GGAGTAACAAAAGGTGTCGTTTTGTCTTGGAATAAAAGCTTTCTAGACCA
T
BS21569.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:20:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
NimB3-RA | 369 | CG34003-PA | 1..369 | 17..385 | 1845 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:20:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
NimB3-RA | 466 | CG34003-RA | 71..443 | 13..385 | 1850 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:20:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13967487..13967694 | 385..178 | 1040 | 100 | Minus |
2L | 23513712 | 2L | 13967751..13967915 | 177..13 | 810 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:20:40 has no hits.
BS21569.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:40:14 Download gff for
BS21569.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
nimB3-RA | 56..422 | 17..383 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:54:11 Download gff for
BS21569.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
NimB3-RA | 75..441 | 17..383 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:57 Download gff for
BS21569.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
NimB3-RA | 75..441 | 17..383 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:57 Download gff for
BS21569.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13967489..13967694 | 178..383 | 100 | <- | Minus |
2L | 13967751..13967911 | 17..177 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:54:11 Download gff for
BS21569.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13967489..13967694 | 178..383 | 100 | <- | Minus |
arm_2L | 13967751..13967911 | 17..177 | 100 | | Minus |
BS21569.pep Sequence
Translation from 16 to 384
> BS21569.pep
MHLTSTLIGLLICGLGIELPTRTAAQFWSVDPVTQWRKEALAERGSGICY
RTLTVETINPNSRNRQFSYCCDGYVNKGTSQNLKCEPICSEDCSNGLCLA
PEECECAPGYYRSNKRCRFVLE*
BS21569.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:06:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
NimB3-PA | 122 | CG34003-PA | 1..122 | 1..122 | 675 | 100 | Plus |
NimB2-PA | 421 | CG31839-PA | 132..209 | 46..113 | 160 | 36.7 | Plus |